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Status |
Public on Feb 01, 2016 |
Title |
HEK 293T-AntimiR rep1 |
Sample type |
RNA |
|
|
Source name |
Human embryonic kidney HEK 293T cells treated with 100nM AntimiR-195 for 24h
|
Organism |
Homo sapiens |
Characteristics |
cell type: Human Embryonic Kidney cell line cell line: HEK 293T
|
Extracted molecule |
total RNA |
Extraction protocol |
The total RNA was extracted using TRIzol reagent (Invitrogen Corporation) according to the manufacturer's protocol.The RNA was resuspended in diethyl pyrocarbonate-treated water, quantified by UV absorbance at 260/280 nm and immediately used for RNA amplification and labeling by Illumina TotalPrep RNA amplification kit
|
Label |
Cy3
|
Label protocol |
As described in the illumina HumanHT12 V4.0 chip processing protocol. Briefly, generation of biotin labelled cRNA from the product of RT cDNA synthesis and 2nd strand cDNA synthesis.
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|
|
Hybridization protocol |
Standard Illumina Hybridization protocol
|
Scan protocol |
Refer to the Illumina Gene Expression System Manual
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Description |
This sample is hybridized to 5504654023_G and 5504654023_H arrays
|
Data processing |
Average Normalization using Illumina Beadstudio
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|
|
Submission date |
Jan 22, 2013 |
Last update date |
Feb 01, 2016 |
Contact name |
Richa Singh |
E-mail(s) |
nsaini@igib.in
|
Phone |
011-27666156
|
Organization name |
Institute of Genomics and Integrative Biology
|
Department |
Functional Genomics Unit
|
Lab |
210
|
Street address |
Mall Road
|
City |
New Delhi |
State/province |
Delhi |
ZIP/Postal code |
110007 |
Country |
India |
|
|
Platform ID |
GPL10558 |
Series (1) |
GSE43656 |
Differential expression of genes after alterations in cellular levels of hsa-miR-195 |
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