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GEO accession:
Sample GSM102556
Query DataSets for GSM102556
Status
Public on Mar 30, 2006
Title
Lung - 6310
Sample type
RNA
Source name
Lung
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.4
Patient Age: 70-80
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 51-55
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Retreatment T: 1
Retreatment N: X
Retreatment M: 1
Retreatment Metastatic Sites: Pulmonary
Retreatment Stage: 4
Retreatment Grade: 3
Primary Site: Lung
Histology: Metastatic Squamous Cell Carcinoma, Non-Keratinizing
Submission date
Mar 30, 2006
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
ecurley@intgen.org
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE60486
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
2246.7
P
0.00011
AFFX-BioB-M_at
3620.1
P
4.4e-005
AFFX-BioB-3_at
2258.6
P
4.4e-005
AFFX-BioC-5_at
6708.6
P
5.2e-005
AFFX-BioC-3_at
7874.7
P
4.4e-005
AFFX-BioDn-5_at
15523.3
P
4.4e-005
AFFX-BioDn-3_at
21158.6
P
4.4e-005
AFFX-CreX-5_at
82437.5
P
5.2e-005
AFFX-CreX-3_at
87841.7
P
4.4e-005
AFFX-DapX-5_at
5155.3
P
4.4e-005
AFFX-DapX-M_at
8919.3
P
6e-005
AFFX-DapX-3_at
12691.6
P
4.4e-005
AFFX-LysX-5_at
456.7
P
0.000225
AFFX-LysX-M_at
962.7
P
0.000127
AFFX-LysX-3_at
1378
P
5.2e-005
AFFX-PheX-5_at
981.2
P
4.4e-005
AFFX-PheX-M_at
1384.5
P
6e-005
AFFX-PheX-3_at
1169.6
P
5.2e-005
AFFX-ThrX-5_at
1337.3
P
0.00011
AFFX-ThrX-M_at
1921.8
P
4.4e-005
Total number of rows:
54675
Table truncated, full table size
1452 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM102556.CEL.gz
7.6 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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