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GEO accession:
Sample GSM1014221
Query DataSets for GSM1014221
Status
Public on Apr 22, 2013
Title
BT 20 21924
Sample type
RNA
Source name
Breast cancer cell line
Organism
Homo sapiens
Characteristics
cell line: BT 20
Growth protocol
Cell lines were grown according to standard conditions.
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted with RNABee (Campro, Veenendaal, the Netherlands) according to the manufacturer procedure
Label
biotin
Label protocol
Standard Affymetrix protocol
Hybridization protocol
Standard Affymetrix protocol
Scan protocol
Standard Affymetrix protocol
Data processing
The data were using Affymetrix software Expression Console with default analysis settings and RMA as normalization method.
Submission date
Oct 03, 2012
Last update date
Apr 22, 2013
Contact name
Marcel Smid
Organization name
Erasmus MC
Department
Medical Oncology
Street address
Dr. Molewaterplein 50
City
Rotterdam
ZIP/Postal code
PO Box 2040, 3000CA
Country
Netherlands
Platform ID
GPL13158
Series (1)
GSE41313
Expression data from breast cancer cell lines
Data table header descriptions
ID_REF
VALUE
log2 RMA signal
Data table
ID_REF
VALUE
1007_PM_s_at
10.32839
1053_PM_at
7.900467
117_PM_at
2.984631
121_PM_at
4.841516
1255_PM_g_at
2.409058
1294_PM_at
5.884059
1316_PM_at
3.400312
1320_PM_at
4.092454
1405_PM_i_at
2.625058
1431_PM_at
2.659192
1438_PM_at
4.891586
1487_PM_at
6.700873
1494_PM_f_at
3.57395
1552256_PM_a_at
6.575393
1552257_PM_a_at
8.631166
1552258_PM_at
3.162313
1552261_PM_at
2.931272
1552263_PM_at
6.102143
1552264_PM_a_at
6.868583
1552266_PM_at
2.878693
Total number of rows:
54715
Table truncated, full table size
1212 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1014221_21924.CEL.gz
2.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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