|
| Status |
Public on Jun 16, 2015 |
| Title |
OCI-D1p [MIP] |
| Sample type |
genomic |
| |
|
| Source name |
Ovarian cell line
|
| Organism |
Homo sapiens |
| Characteristics |
histology: Dysgerminoma
sample origin: Primary
sample type: frozen
|
| Treatment protocol |
None
|
| Growth protocol |
Cells were grown in 10cm dishes and extracts were harvested at 80% confluency
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Cell monolayers were lysed directly in RLT+ buffer and homogenized with Qiashredder columns (Qiagen Allprep kit).
|
| Label |
Biotin
|
| Label protocol |
Labeling was performed by Affymetrix according to the platform protocol
|
| |
|
| Hybridization protocol |
Hybridization was performed by Affymetrix according to the platform protocol
|
| Scan protocol |
Scanning was performed by Affymetrix
|
| Description |
A/T Array: a520683-00-805769-070211-4108258-85039.CEL
C/G Array: a520683-00-805769-070211-4108258-85022.CEL
|
| Data processing |
Data processing was performed by Affymetrix
Tables contain signal A intensity and signal B intensity, copynumber, Allele Ratio and Allelic Difference as provided by Affymetrix
|
| |
|
| Submission date |
Sep 11, 2012 |
| Last update date |
Jun 16, 2015 |
| Contact name |
Tan A Ince |
| E-mail(s) |
Tince@med.miami.edu
|
| Phone |
305-243-1782
|
| Organization name |
University of Miami - Miller School of Medicine
|
| Department |
Sylvester Cancer Center
|
| Lab |
Dr. Ince Lab - TCC
|
| Street address |
1501 NW 10th Avenue, Rm 926
|
| City |
Miami |
| State/province |
FL |
| ZIP/Postal code |
33136 |
| Country |
USA |
| |
|
| Platform ID |
GPL13270 |
| Series (2) |
| GSE40786 |
Characterization of novel ovarian tumor cell lines that retain the phenotype of primary tumors [MIP] |
| GSE40788 |
Characterization of novel ovarian tumor cell lines that retain the phenotype of primary tumors |
|
