|
| Status |
Public on Jun 14, 2017 |
| Title |
T Cell Expression of AhR Inhibits the Maintenance of pTreg Cells in the GI Tract in Acute GvHD |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Transcriptome analysis of murine T cells pre- and post-transplant.
|
| |
|
| Overall design |
Sorted CD4 and CD8 splenic T cells where evaluated by RNA-seq either at the time of allogeneic transplant or 14 days after.
|
| |
|
| Contributor(s) |
Dant T, Bruce D, Serody J |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jun 12, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Jonathan S Serody |
| E-mail(s) |
jonathan_serody@med.unc.edu
|
| Organization name |
University of North Carolina at Chapel Hill
|
| Department |
Lineberger Comprehensive Cancer Center
|
| Lab |
Serody Lab
|
| Street address |
125 Mason Farm Rd.
|
| City |
Chapel Hill |
| State/province |
NC |
| ZIP/Postal code |
27599 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (4)
|
| GSM2666458 |
BV5-R-Donor-CD4-RNA_GGCTAC_L006_R1_001.fastq.gz |
| GSM2666459 |
BV6-R-Donor-CD8-RNA_CTTGTA_L006_R1_001.fastq.gz |
| GSM2666460 |
BV9-R-CD4-d12-Allo-RNA_ATGTCA_L006_R1_001.fastq.gz |
| GSM2666461 |
BV10-R-CD8-d12-Allo-RNA_CCGTCC_L006_R1_001.fastq.gz |
|
| Relations |
| BioProject |
PRJNA390274 |
| SRA |
SRP109098 |
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