GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE99353
Query DataSets for GSE99353
Status
Public on Mar 08, 2018
Title
Frontal cortex transcriptomic analysis of a TDP-43 Q331K knock-in mouse [5month]
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Summary
Here we analyse transcriptome profiles within the frontal cortex between wild type, heterozygous and homozygous TDP-43 Q331K knock-in mice
Overall design
Transcriptome (RNA-Seq) from 5 month old frontal cortex tissue
Contributor(s)
White M
,
Sreedharan J
Citation(s)
29556029
Submission date
May 26, 2017
Last update date
Jul 29, 2019
Contact name
Felix Krueger
E-mail(s)
fkrueger@altoslabs.com
Organization name
Altos Labs
Department
Bioinformatics
Street address
Granta Park
City
Cambridge
ZIP/Postal code
CB21 6GP
Country
United Kingdom
Platforms (1)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
Samples (20)
Less...
More...
GSM2642815
5month-frontal-cortex[+/+]1
GSM2642816
5month-frontal-cortex[+/+]2
GSM2642817
5month-frontal-cortex[+/+]3
GSM2642818
5month-frontal-cortex[+/+]4
GSM2642819
5month-frontal-cortex[+/+]5
GSM2642820
5month-frontal-cortex[+/+]6
GSM2642821
5month-frontal-cortex[Q331K/+]1
GSM2642822
5month-frontal-cortex[Q331K/+]2
GSM2642823
5month-frontal-cortex[Q331K/+]3
GSM2642824
5month-frontal-cortex[Q331K/+]4
GSM2642825
5month-frontal-cortex[Q331K/+]5
GSM2642826
5month-frontal-cortex[Q331K/+]6
GSM2642827
5month-frontal-cortex[Q331K/Q331K]1
GSM2642828
5month-frontal-cortex[Q331K/Q331K]2
GSM2642829
5month-frontal-cortex[Q331K/Q331K]3
GSM2642830
5month-frontal-cortex[Q331K/Q331K]4
GSM2642831
5month-frontal-cortex[Q331K/Q331K]5
GSM2642832
5month-frontal-cortex[Q331K/Q331K]6
GSM2642833
5month-frontal-cortex[Q331K/Q331K]7
GSM2642834
5month-frontal-cortex[Q331K/Q331K]8
This SubSeries is part of SuperSeries:
GSE99354
Lower motor neuron and Frontal cortex transcriptomic analysis of a TDP-43 Q331K knock-in mouse
Relations
BioProject
PRJNA388188
SRA
SRP108127
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE99353_frontal_cortex_raw_counts.txt.gz
1.9 Mb
(ftp)
(http)
TXT
SRA Run Selector
Raw data are available in SRA
Processed data are available on Series record
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
Less...
More...