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GEO accession:
Series GSE99172
Query DataSets for GSE99172
Status
Public on May 23, 2017
Title
Single-cell chromatin accessibility data from K562 cells using scATAC-seq
Organism
Homo sapiens
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Summary
Profiles of single cell epigenomes, assayed using scATAC-seq, in K562 cells.
Overall design
scATAC-seq in K562 cells.
Contributor(s)
Schep A
,
Buenrostro J
,
Greenleaf W
,
Wu B
Citation(s)
28825706
Submission date
May 22, 2017
Last update date
May 15, 2019
Contact name
William J Greenleaf
E-mail(s)
wjg@stanford.edu
Organization name
Stanford University
Department
Genetics
Street address
279 Campus Drive West
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platforms (1)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
Samples (288)
Less...
More...
GSM2634765
singles-K562-141104-1
GSM2634766
singles-K562-141104-10
GSM2634767
singles-K562-141104-11
GSM2634768
singles-K562-141104-12
GSM2634769
singles-K562-141104-13
GSM2634770
singles-K562-141104-14
GSM2634771
singles-K562-141104-15
GSM2634772
singles-K562-141104-16
GSM2634773
singles-K562-141104-17
GSM2634774
singles-K562-141104-18
GSM2634775
singles-K562-141104-19
GSM2634776
singles-K562-141104-2
GSM2634777
singles-K562-141104-20
GSM2634778
singles-K562-141104-21
GSM2634779
singles-K562-141104-22
GSM2634780
singles-K562-141104-23
GSM2634781
singles-K562-141104-24
GSM2634782
singles-K562-141104-25
GSM2634783
singles-K562-141104-26
GSM2634784
singles-K562-141104-27
GSM2634785
singles-K562-141104-28
GSM2634786
singles-K562-141104-29
GSM2634787
singles-K562-141104-3
GSM2634788
singles-K562-141104-30
GSM2634789
singles-K562-141104-31
GSM2634790
singles-K562-141104-32
GSM2634791
singles-K562-141104-33
GSM2634792
singles-K562-141104-34
GSM2634793
singles-K562-141104-35
GSM2634794
singles-K562-141104-36
GSM2634795
singles-K562-141104-37
GSM2634796
singles-K562-141104-38
GSM2634797
singles-K562-141104-39
GSM2634798
singles-K562-141104-4
GSM2634799
singles-K562-141104-40
GSM2634800
singles-K562-141104-41
GSM2634801
singles-K562-141104-42
GSM2634802
singles-K562-141104-43
GSM2634803
singles-K562-141104-44
GSM2634804
singles-K562-141104-45
GSM2634805
singles-K562-141104-46
GSM2634806
singles-K562-141104-47
GSM2634807
singles-K562-141104-48
GSM2634808
singles-K562-141104-49
GSM2634809
singles-K562-141104-5
GSM2634810
singles-K562-141104-50
GSM2634811
singles-K562-141104-51
GSM2634812
singles-K562-141104-52
GSM2634813
singles-K562-141104-53
GSM2634814
singles-K562-141104-54
GSM2634815
singles-K562-141104-55
GSM2634816
singles-K562-141104-56
GSM2634817
singles-K562-141104-57
GSM2634818
singles-K562-141104-58
GSM2634819
singles-K562-141104-59
GSM2634820
singles-K562-141104-6
GSM2634821
singles-K562-141104-60
GSM2634822
singles-K562-141104-61
GSM2634823
singles-K562-141104-62
GSM2634824
singles-K562-141104-63
GSM2634825
singles-K562-141104-64
GSM2634826
singles-K562-141104-65
GSM2634827
singles-K562-141104-66
GSM2634828
singles-K562-141104-67
GSM2634829
singles-K562-141104-68
GSM2634830
singles-K562-141104-69
GSM2634831
singles-K562-141104-7
GSM2634832
singles-K562-141104-70
GSM2634833
singles-K562-141104-71
GSM2634834
singles-K562-141104-72
GSM2634835
singles-K562-141104-73
GSM2634836
singles-K562-141104-74
GSM2634837
singles-K562-141104-75
GSM2634838
singles-K562-141104-76
GSM2634839
singles-K562-141104-77
GSM2634840
singles-K562-141104-78
GSM2634841
singles-K562-141104-79
GSM2634842
singles-K562-141104-8
GSM2634843
singles-K562-141104-80
GSM2634844
singles-K562-141104-81
GSM2634845
singles-K562-141104-82
GSM2634846
singles-K562-141104-83
GSM2634847
singles-K562-141104-84
GSM2634848
singles-K562-141104-85
GSM2634849
singles-K562-141104-86
GSM2634850
singles-K562-141104-87
GSM2634851
singles-K562-141104-88
GSM2634852
singles-K562-141104-89
GSM2634853
singles-K562-141104-9
GSM2634854
singles-K562-141104-90
GSM2634855
singles-K562-141104-91
GSM2634856
singles-K562-141104-92
GSM2634857
singles-K562-141104-93
GSM2634858
singles-K562-141104-94
GSM2634859
singles-K562-141104-95
GSM2634860
singles-K562-141104-96
GSM2634861
singles-K562-141105-1
GSM2634862
singles-K562-141105-10
GSM2634863
singles-K562-141105-11
GSM2634864
singles-K562-141105-12
GSM2634865
singles-K562-141105-13
GSM2634866
singles-K562-141105-14
GSM2634867
singles-K562-141105-15
GSM2634868
singles-K562-141105-16
GSM2634869
singles-K562-141105-17
GSM2634870
singles-K562-141105-18
GSM2634871
singles-K562-141105-19
GSM2634872
singles-K562-141105-2
GSM2634873
singles-K562-141105-20
GSM2634874
singles-K562-141105-21
GSM2634875
singles-K562-141105-22
GSM2634876
singles-K562-141105-23
GSM2634877
singles-K562-141105-24
GSM2634878
singles-K562-141105-25
GSM2634879
singles-K562-141105-26
GSM2634880
singles-K562-141105-27
GSM2634881
singles-K562-141105-28
GSM2634882
singles-K562-141105-29
GSM2634883
singles-K562-141105-3
GSM2634884
singles-K562-141105-30
GSM2634885
singles-K562-141105-31
GSM2634886
singles-K562-141105-32
GSM2634887
singles-K562-141105-33
GSM2634888
singles-K562-141105-34
GSM2634889
singles-K562-141105-35
GSM2634890
singles-K562-141105-36
GSM2634891
singles-K562-141105-37
GSM2634892
singles-K562-141105-38
GSM2634893
singles-K562-141105-39
GSM2634894
singles-K562-141105-4
GSM2634895
singles-K562-141105-40
GSM2634896
singles-K562-141105-41
GSM2634897
singles-K562-141105-42
GSM2634898
singles-K562-141105-43
GSM2634899
singles-K562-141105-44
GSM2634900
singles-K562-141105-45
GSM2634901
singles-K562-141105-46
GSM2634902
singles-K562-141105-47
GSM2634903
singles-K562-141105-48
GSM2634904
singles-K562-141105-49
GSM2634905
singles-K562-141105-5
GSM2634906
singles-K562-141105-50
GSM2634907
singles-K562-141105-51
GSM2634908
singles-K562-141105-52
GSM2634909
singles-K562-141105-53
GSM2634910
singles-K562-141105-54
GSM2634911
singles-K562-141105-55
GSM2634912
singles-K562-141105-56
GSM2634913
singles-K562-141105-57
GSM2634914
singles-K562-141105-58
GSM2634915
singles-K562-141105-59
GSM2634916
singles-K562-141105-6
GSM2634917
singles-K562-141105-60
GSM2634918
singles-K562-141105-61
GSM2634919
singles-K562-141105-62
GSM2634920
singles-K562-141105-63
GSM2634921
singles-K562-141105-64
GSM2634922
singles-K562-141105-65
GSM2634923
singles-K562-141105-66
GSM2634924
singles-K562-141105-67
GSM2634925
singles-K562-141105-68
GSM2634926
singles-K562-141105-69
GSM2634927
singles-K562-141105-7
GSM2634928
singles-K562-141105-70
GSM2634929
singles-K562-141105-71
GSM2634930
singles-K562-141105-72
GSM2634931
singles-K562-141105-73
GSM2634932
singles-K562-141105-74
GSM2634933
singles-K562-141105-75
GSM2634934
singles-K562-141105-76
GSM2634935
singles-K562-141105-77
GSM2634936
singles-K562-141105-78
GSM2634937
singles-K562-141105-79
GSM2634938
singles-K562-141105-8
GSM2634939
singles-K562-141105-80
GSM2634940
singles-K562-141105-81
GSM2634941
singles-K562-141105-82
GSM2634942
singles-K562-141105-83
GSM2634943
singles-K562-141105-84
GSM2634944
singles-K562-141105-85
GSM2634945
singles-K562-141105-86
GSM2634946
singles-K562-141105-87
GSM2634947
singles-K562-141105-88
GSM2634948
singles-K562-141105-89
GSM2634949
singles-K562-141105-9
GSM2634950
singles-K562-141105-90
GSM2634951
singles-K562-141105-91
GSM2634952
singles-K562-141105-92
GSM2634953
singles-K562-141105-93
GSM2634954
singles-K562-141105-94
GSM2634955
singles-K562-141105-95
GSM2634956
singles-K562-141105-96
GSM2634957
singles-K562-141106-1
GSM2634958
singles-K562-141106-10
GSM2634959
singles-K562-141106-11
GSM2634960
singles-K562-141106-12
GSM2634961
singles-K562-141106-13
GSM2634962
singles-K562-141106-14
GSM2634963
singles-K562-141106-15
GSM2634964
singles-K562-141106-16
GSM2634965
singles-K562-141106-17
GSM2634966
singles-K562-141106-18
GSM2634967
singles-K562-141106-19
GSM2634968
singles-K562-141106-2
GSM2634969
singles-K562-141106-20
GSM2634970
singles-K562-141106-21
GSM2634971
singles-K562-141106-22
GSM2634972
singles-K562-141106-23
GSM2634973
singles-K562-141106-24
GSM2634974
singles-K562-141106-25
GSM2634975
singles-K562-141106-26
GSM2634976
singles-K562-141106-27
GSM2634977
singles-K562-141106-28
GSM2634978
singles-K562-141106-29
GSM2634979
singles-K562-141106-3
GSM2634980
singles-K562-141106-30
GSM2634981
singles-K562-141106-31
GSM2634982
singles-K562-141106-32
GSM2634983
singles-K562-141106-33
GSM2634984
singles-K562-141106-34
GSM2634985
singles-K562-141106-35
GSM2634986
singles-K562-141106-36
GSM2634987
singles-K562-141106-37
GSM2634988
singles-K562-141106-38
GSM2634989
singles-K562-141106-39
GSM2634990
singles-K562-141106-4
GSM2634991
singles-K562-141106-40
GSM2634992
singles-K562-141106-41
GSM2634993
singles-K562-141106-42
GSM2634994
singles-K562-141106-43
GSM2634995
singles-K562-141106-44
GSM2634996
singles-K562-141106-45
GSM2634997
singles-K562-141106-46
GSM2634998
singles-K562-141106-47
GSM2634999
singles-K562-141106-48
GSM2635000
singles-K562-141106-49
GSM2635001
singles-K562-141106-5
GSM2635002
singles-K562-141106-50
GSM2635003
singles-K562-141106-51
GSM2635004
singles-K562-141106-52
GSM2635005
singles-K562-141106-53
GSM2635006
singles-K562-141106-54
GSM2635007
singles-K562-141106-55
GSM2635008
singles-K562-141106-56
GSM2635009
singles-K562-141106-57
GSM2635010
singles-K562-141106-58
GSM2635011
singles-K562-141106-59
GSM2635012
singles-K562-141106-6
GSM2635013
singles-K562-141106-60
GSM2635014
singles-K562-141106-61
GSM2635015
singles-K562-141106-62
GSM2635016
singles-K562-141106-63
GSM2635017
singles-K562-141106-64
GSM2635018
singles-K562-141106-65
GSM2635019
singles-K562-141106-66
GSM2635020
singles-K562-141106-67
GSM2635021
singles-K562-141106-68
GSM2635022
singles-K562-141106-69
GSM2635023
singles-K562-141106-7
GSM2635024
singles-K562-141106-70
GSM2635025
singles-K562-141106-71
GSM2635026
singles-K562-141106-72
GSM2635027
singles-K562-141106-73
GSM2635028
singles-K562-141106-74
GSM2635029
singles-K562-141106-75
GSM2635030
singles-K562-141106-76
GSM2635031
singles-K562-141106-77
GSM2635032
singles-K562-141106-78
GSM2635033
singles-K562-141106-79
GSM2635034
singles-K562-141106-8
GSM2635035
singles-K562-141106-80
GSM2635036
singles-K562-141106-81
GSM2635037
singles-K562-141106-82
GSM2635038
singles-K562-141106-83
GSM2635039
singles-K562-141106-84
GSM2635040
singles-K562-141106-85
GSM2635041
singles-K562-141106-86
GSM2635042
singles-K562-141106-87
GSM2635043
singles-K562-141106-88
GSM2635044
singles-K562-141106-89
GSM2635045
singles-K562-141106-9
GSM2635046
singles-K562-141106-90
GSM2635047
singles-K562-141106-91
GSM2635048
singles-K562-141106-92
GSM2635049
singles-K562-141106-93
GSM2635050
singles-K562-141106-94
GSM2635051
singles-K562-141106-95
GSM2635052
singles-K562-141106-96
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GSM1596532
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GSM1596533
Reanalysis of
GSM1596534
Reanalysis of
GSM1596535
Reanalysis of
GSM1596536
Reanalysis of
GSM1596537
Reanalysis of
GSM1596538
Reanalysis of
GSM1596539
Reanalysis of
GSM1596540
Reanalysis of
GSM1596541
Reanalysis of
GSM1596542
Reanalysis of
GSM1597407
Reanalysis of
GSM1597408
Reanalysis of
GSM1597409
Reanalysis of
GSM1597410
Reanalysis of
GSM1597411
Reanalysis of
GSM1597412
Reanalysis of
GSM1597413
Reanalysis of
GSM1597414
Reanalysis of
GSM1597415
Reanalysis of
GSM1597416
Reanalysis of
GSM1597417
Reanalysis of
GSM1597418
Reanalysis of
GSM1597419
Reanalysis of
GSM1597420
Reanalysis of
GSM1597421
Reanalysis of
GSM1597422
Reanalysis of
GSM1597423
Reanalysis of
GSM1597424
Reanalysis of
GSM1597425
Reanalysis of
GSM1597426
Reanalysis of
GSM1597427
Reanalysis of
GSM1597428
Reanalysis of
GSM1597429
Reanalysis of
GSM1597430
Reanalysis of
GSM1597431
Reanalysis of
GSM1597432
Reanalysis of
GSM1597433
Reanalysis of
GSM1597434
Reanalysis of
GSM1597435
Reanalysis of
GSM1597436
Reanalysis of
GSM1597437
Reanalysis of
GSM1597438
Reanalysis of
GSM1597439
Reanalysis of
GSM1597440
Reanalysis of
GSM1597441
Reanalysis of
GSM1597442
Reanalysis of
GSM1597443
Reanalysis of
GSM1597444
Reanalysis of
GSM1597445
Reanalysis of
GSM1597446
Reanalysis of
GSM1597447
Reanalysis of
GSM1597448
Reanalysis of
GSM1597449
Reanalysis of
GSM1597450
Reanalysis of
GSM1597451
Reanalysis of
GSM1597452
Reanalysis of
GSM1597453
Reanalysis of
GSM1597454
Reanalysis of
GSM1597455
Reanalysis of
GSM1597456
Reanalysis of
GSM1597457
Reanalysis of
GSM1597458
Reanalysis of
GSM1597459
Reanalysis of
GSM1597460
Reanalysis of
GSM1597461
Reanalysis of
GSM1597462
Reanalysis of
GSM1597463
Reanalysis of
GSM1597464
Reanalysis of
GSM1597465
Reanalysis of
GSM1597466
Reanalysis of
GSM1597467
Reanalysis of
GSM1597468
Reanalysis of
GSM1597469
Reanalysis of
GSM1597470
Reanalysis of
GSM1597471
Reanalysis of
GSM1597472
Reanalysis of
GSM1597473
Reanalysis of
GSM1597474
Reanalysis of
GSM1597475
Reanalysis of
GSM1597476
Reanalysis of
GSM1597477
Reanalysis of
GSM1597478
Reanalysis of
GSM1597479
Reanalysis of
GSM1597480
Reanalysis of
GSM1597481
Reanalysis of
GSM1597482
Reanalysis of
GSM1597483
Reanalysis of
GSM1597484
Reanalysis of
GSM1597485
Reanalysis of
GSM1597486
Reanalysis of
GSM1597487
Reanalysis of
GSM1597488
Reanalysis of
GSM1597489
Reanalysis of
GSM1597490
Reanalysis of
GSM1597491
Reanalysis of
GSM1597492
Reanalysis of
GSM1597493
Reanalysis of
GSM1597494
Reanalysis of
GSM1597495
Reanalysis of
GSM1597496
Reanalysis of
GSM1597497
Reanalysis of
GSM1597498
Reanalysis of
GSM1597499
Reanalysis of
GSM1597500
Reanalysis of
GSM1597501
Reanalysis of
GSM1597502
BioProject
PRJNA387476
SRA
SRP107799
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE99172_scatac_counts.csv.gz
13.6 Mb
(ftp)
(http)
CSV
SRA Run Selector
Raw data are available in SRA
Processed data are available on Series record
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