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Series GSE99095 Query DataSets for GSE99095
Status Public on Oct 13, 2017
Title Single-cell RNA-seq reveals differentiation hierarchy of normal human bone marrow and a distinct transcriptome signature of aneuploid cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary In order to get a better understanding of the gene signature of aneuploid cells, we applied single cell RNA sequencing on human bone marrow cells from healthy donors and patients with bone marrow failure and cytogenetic abnormalities. We chacterized normal hemaopoiesis as binary differentiation and identified aneuploid cells from patient samples.
Overall design Single Cell RNA-seq
The processed 'normalizedExpression.csv' file includes data for cells which pass the quality controls.
Contributor(s) Zhao X, Gao S
Citation(s) 29030335, 30545929, 33168060
Submission date May 19, 2017
Last update date Nov 16, 2020
Contact name Shouguo Gao
Phone 3014029014
Organization name National Institutes of Health
Department NHLBI
Lab Hematology Branch
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platforms (2)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (1202)
GSM2632218 P1_bulk
GSM2632219 P1_cell_10
GSM2632220 P1_cell_11
BioProject PRJNA387283
SRA SRP107391

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE99095_lncRNA.gtf.gz 105.4 Kb (ftp)(http) GTF
GSE99095_lncRNA_CAGE.gtf.gz 20.0 Kb (ftp)(http) GTF
GSE99095_normalizedExpression.csv.gz 88.5 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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