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Series GSE98900 Query DataSets for GSE98900
Status Public on May 15, 2020
Title TIMP3, a CLOCK-controlled gene, determines cell susceptibility to UV-induced expression of inflammatory factors in human keratinocytes.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To search for CLOCK-controlled genes in human keratinocytes, we introduced siRNAs against CLOCK and harvested the cells at two time points, ZT 32 and 44. We speculated that those genes that were downregulated at both ZT time points may be selectively regulated by CLOCK
 
Overall design mRNA profiles of scrambled or CLOCK siRNAs treated NHEK at 2 different time points
 
Contributor(s) Park S, Kim K
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Submission date May 15, 2017
Last update date May 15, 2020
Contact name Sunyoung Park
E-mail(s) ivysy@hanmail.net
Organization name Amorepacific corporation
Street address 1920, Yonggu-daero
City Yongin-si
State/province Gyeonggi-do
ZIP/Postal code 17074
Country South Korea
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (4)
GSM2627279 si-scrambled ZT32
GSM2627280 si-scrambled ZT44
GSM2627281 si-CLOCK ZT32
Relations
BioProject PRJNA386900
SRA SRP107185

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98900_FPKM_all_samples.xlsx 3.7 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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