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Series GSE98802 Query DataSets for GSE98802
Status Public on Jan 15, 2018
Title Loss of CNFy toxin-induced inflammation drives Yersinia pseudotuberculosis into persistency
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Gastrointestinal infections caused by enteric yersiniae can become persistent and complicated by relapsing enteritis and severe autoimmune disorders. To establish a persistent infection, the bacteria have to cope with hostile surroundings when they transmigrate through the intestinal epithelium and colonize underlying gut-associated lymphatic tissues. How the bacteria gain a foothold in the face of host immune responses is poorly understood. Here, we show that the CNFY toxin, which enhances translocation of the antiphagocytic Yop effectors, induces IL-6-triggered inflammatory responses. This results in extensive tissue destruction, alteration of the intestinal microbiota and bacterial clearance. An elimination of CNFY, however, increases inter-feron-γ-mediated responses, comprising non-inflammatory antimicrobial activities and Ido1-promoted tolerogenesis. This process is accompanied by a preterm reprogram-ming of the pathogen's transcriptional response towards persistence, which gives the bacteria a fitness edge against host responses. These results have significant implica-tions for our understanding how enteric bacteria establish a commensal-type life style.
 
Overall design RNA of Y. pseudotuberculosis infected and uninfected caecal tissue of Mus musculus
 
Contributor(s) Beckstette M, Heine W, Dersch P, Heroven A
Citation(s) 29390040
Submission date May 11, 2017
Last update date Jul 25, 2021
Contact name Michael Beckstette
Organization name Helmholtz Centre for Infection Research
Department Molecular Infection Biology
Lab Experimental Immunology
Street address Inhoffenstrase 7
City Braunschweig
State/province Lower Saxony
ZIP/Postal code 38124
Country Germany
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (18)
GSM2612362 5 dpi uninfected 1
GSM2612363 5 dpi uninfected 2
GSM2612364 5 dpi uninfected 3
Relations
BioProject PRJNA386276
SRA SRP106863

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98802_DESeq2_genes_diffexp_by_fc_42_dpi_deltacnfY_vs_42_dpi_YPIII.xls.gz 4.3 Mb (ftp)(http) XLS
GSE98802_DESeq2_genes_diffexp_by_fc_42_dpi_uninfected_vs_42_dpi_YPIII.xls.gz 4.6 Mb (ftp)(http) XLS
GSE98802_DESeq2_genes_diffexp_by_fc_42_dpi_uninfected_vs_42_dpi_deltacnfY.xls.gz 5.2 Mb (ftp)(http) XLS
GSE98802_DESeq2_genes_diffexp_by_fc_5_dpi_YPIII_vs_5_dpi_deltacnfY.xls.gz 4.3 Mb (ftp)(http) XLS
GSE98802_DESeq2_genes_diffexp_by_fc_5_dpi_uninfected_vs_5_dpi_YPIII.xls.gz 4.9 Mb (ftp)(http) XLS
GSE98802_DESeq2_genes_diffexp_by_fc_5_dpi_uninfected_vs_5_dpi_deltacnfY.xls.gz 4.9 Mb (ftp)(http) XLS
GSE98802_RAW.tar 8.7 Mb (http)(custom) TAR (of TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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