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Series GSE98273 Query DataSets for GSE98273
Status Public on Jun 16, 2017
Title RNA-sequencing in MDA-231-D cells transfected with ZEB1 or ZEB2 siRNAs
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We searched for roles of ZEB1and/or ZEB2 during EMT by RNA-seq in breast cancer cells.
Overall design Expression of mRNA in a basal type breast cancer cell line MDA-231-D transfected with ZEB1 or ZEB2 siRNAs.
Contributor(s) Katsura A, Tamura Y, Morikawa M, Sakurai T, Mizutani A, Morishita Y, Miyazono K, Koinuma D
Citation(s) 28618162
Submission date Apr 27, 2017
Last update date May 15, 2019
Contact name Daizo Koinuma
Organization name University of Tokyo
Department Pathology
Street address Hongo 7-3-1, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-0033
Country Japan
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (5)
GSM2590110 RNA-seq siNC, si Negative control
GSM2590111 RNA-seq, si ZEB1-1
GSM2590112 RNA-seq, si ZEB1-2
This SubSeries is part of SuperSeries:
GSE89206 ZEB1-regulated inflammatory phenotype in breast cancer cells
BioProject PRJNA384523
SRA SRP105333

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98273_genes.fpkm_tracking.txt.gz 1.5 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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