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Series GSE97844 Query DataSets for GSE97844
Status Public on Apr 16, 2017
Title Genome-wide analysis of the altered gene expression in the transgenic mice ectopically expressing the human SRY. [heart]
Organism Mus musculus
Experiment type Expression profiling by array
Summary Analysis of the effects of an ectopically expressed human SRY (hSRY) on gene expression in the mouse heart. We hypothesize that aberrant expression of the human SRY gene could affect the development and physiology of transgenic mice. To test this hypothesis we have established a Cre-LoxP transgene activation system, thereby activating and expressing the hSRY transgene at the single-cell embryonic stage. Such transgenic mice were born of similar sizes as non-transgenic littermates, but retard in postnatal growth and all die within two weeks of age. To determine the molecular changes associated with such phenotypes, we have analyzed the transcriptomes of hearts of pups expressing (hSRY-ON) and not-expressing (hSRY-OFF) the hSRY transgene. The results provide important information demonstrating that ectopic expression of hSRY resulted in altered expression patterns of numerous genes associating with the development of cardiovascular system and pathogenesis of cardiovascular diseases in the heart.
 
Overall design Total RNAs isolated from the heart of P6 male hSRY-ON mice was compared to those of age matched male hSRY-OFF mice.
 
Contributor(s) Kido T, Lau YC
Citation(s) 28646221
Submission date Apr 15, 2017
Last update date Jun 14, 2018
Contact name Yun-Fai Chris Lau
E-mail(s) chris.lau@ucsf.edu
Organization name University of California, San Francisco
Department Department of Medicine, VA Medical Center
Street address 4150 Clement Street
City San Francisco
State/province CA
ZIP/Postal code 94121
Country USA
 
Platforms (1)
GPL6885 Illumina MouseRef-8 v2.0 expression beadchip
Samples (6)
GSM2579191 hSRY-OFF mouse heart rep1
GSM2579192 hSRY-OFF mouse heart rep2
GSM2579193 hSRY-OFF mouse heart rep3
This SubSeries is part of SuperSeries:
GSE97847 Genome-wide analysis of the altered gene expression in the transgenic mice ectopically expressing the human SRY.
Relations
BioProject PRJNA383042

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97844_RAW.tar 8.6 Mb (http)(custom) TAR (of IDAT)
GSE97844_non-normalized_heart.txt.gz 1.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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