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Series GSE97544 Query DataSets for GSE97544
Status Public on Aug 17, 2017
Title Striatal transcriptome analysis of Shank3-overexpressing mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Shank3 is a core excitatory postsynaptic protein enriched in the striatum. We have previously generated and characterized Shank3-overexpressing transgenic mice, and found that these mice exhibited manic-like behavioral phenotypes. To understand molecular mechanisms underlying the behavioral changes, we performed transcriptome (RNA-sequencing) analysis of the striatal tissues from 12-week-old wild-type and Shank3 transgenic mice.
 
Overall design Striatal transcriptome of 12-week-old wild-type and Shank3 transgenic (TG) mice.
 
Contributor(s) Han K, Lee Y, Kang H
Citation(s) 28701918
Submission date Apr 09, 2017
Last update date May 15, 2019
Contact name Kihoon Han
E-mail(s) neurohan@korea.ac.kr
Organization name Korea University College of Medicine
Department Neuroscience
Street address 73, Inchon-ro, Seongbuk-gu
City Seoul
ZIP/Postal code 02841
Country South Korea
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (6)
GSM2571871 Transgenic sample 1
GSM2571872 Transgenic sample 2
GSM2571873 Transgenic sample 3
Relations
BioProject PRJNA382260
SRA SRP103754

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97544_processed_data_DESeq_count.txt.gz 917.0 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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