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Series GSE97389 Query DataSets for GSE97389
Status Public on Jan 03, 2018
Title Stabilization of NIK suppresses MLL-AF9-induced acute myeloid leukemia
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Comparison of transcriptome between control and NIK-stabilized leukemia stem cells
 
Overall design murine MLL-AF9 acute myeloid leukemia was generated using bone marrow progenitor cells (lin-cKit+) from NIKERT2 mice (crossing Rosa-loxp-STOP-loxp-NIK mice with Rosa-CreERT2 mice). Leukemia stem cells were sorted by FACS from tamoxifen treated (LSPCT group) and untreated (LSPC group) fully developed leukemia mice and used for RNAseq analysis.
 
Contributor(s) Zhao C
Citation(s) 29320732
Submission date Apr 04, 2017
Last update date Jul 31, 2019
Contact name Thomas B Bair
E-mail(s) iihg-bioinformatics@uiowa.edu
Organization name University of Iowa
Street address 335 EMRB
City Iowa City
State/province IA
ZIP/Postal code 52242
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM2563698 LSPC rep1
GSM2563699 LSPC rep2
GSM2563700 LSPC rep3
Relations
BioProject PRJNA381614
SRA SRP103019

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97389_RAW.tar 750.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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