NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE96608 Query DataSets for GSE96608
Status Public on Jan 30, 2018
Title Interplay between genome topology and gene regulation during somatic cell reprogramming [RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Studies of genome topology, chromatin state and transcriptome dynamics during highly-efficient somatic cell reprogramming
 
Overall design Gene expression profiling of B cells reprogramming to pluripotent cells and (induced) pluripotent stem cells using RNA-Seq
 
Contributor(s) Stadhouders R, Vidal E, Gomez A, Graf T
Citation(s) 29335546, 34082786
Submission date Mar 14, 2017
Last update date Jun 08, 2021
Contact name Thomas Graf
E-mail(s) thomas.graf@crg.eu
Organization name CRG (Center for Genomic Regulation)
Department Gene Regulation, Stem Cells and Cancer
Lab Hematopoietic stem cells, transdifferentiation and reprogramming
Street address c/Dr. Aiguader, 88. PRBB Building
City Barcelona
ZIP/Postal code 08003
Country Spain
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (16)
GSM2536509 B_rep1
GSM2536510 B_rep2
GSM2536511 Ba_rep1
This SubSeries is part of SuperSeries:
GSE96611 Interplay between genome topology and gene regulation during somatic cell reprogramming
Relations
BioProject PRJNA379164
SRA SRP101880

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE96608_RAW.tar 5.1 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap