NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE96561 Query DataSets for GSE96561
Status Public on Mar 30, 2017
Title Gene expression profile during cardiac stress induced by transverse aortic constriction (TAC) and myocardial infarction (MI) with or without BET protein inhibitor JQ1 in mouse hearts
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: to reveal cardiac stress-inducible genes that are attnuated by BET inhibition
 
Overall design Method: Adult C57Bl/6 mice (male, 10 wks) were subjected to sham surgery and received vehicle injection for 6 weeks starting post-op week 4.
Method: Adult C57Bl/6 mice (male, 10 wks) were subjected to TAC surgery with a 27 gauge needle. Starting at the beginning of post-op week 4, JQ1 at 50 mg/kg/d was adminstrated via I.P. injections and continue for another 6 weeks.
Method: Adult C57Bl/6 mice (male, 10 wks) were subjected to Permanent Ligation of the Left Anterior Descending Coronary Artery. Beginning from post-op day 6, JQ1 at 25 mg/kg/d or vehcle was given via I.P. for 6 days and then increased to 50 mg/kg/d for additional 16 days.
 
Contributor(s) Duan Q, Lemieux M, McMahon S, Anand P, Haldar S
Citation(s) 28515341
Submission date Mar 13, 2017
Last update date May 15, 2019
Contact name Saptarsi Haldar
E-mail(s) saptarsi.haldar@gladstone.ucsf.edu
Organization name Gladstone Institute of Cardiovascular Disease
Street address 1650 Owens St
City San Francisco
ZIP/Postal code 94158
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (21)
GSM2535615 mus_heart_sham_veh_1
GSM2535616 mus_heart_sham_veh_2
GSM2535617 mus_heart_sham_veh_3
This SubSeries is part of SuperSeries:
GSE96566 BET bromodomain inhibition
Relations
BioProject PRJNA379048
SRA SRP101884

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE96561_MI_TAC_raw_counts.txt.gz 677.6 Kb (ftp)(http) TXT
GSE96561_Sham_raw_counts.txt.gz 842.5 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap