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| Status |
Public on Nov 14, 2017 |
| Title |
Transcriptomic and proteomic landscape of mitochondrial dysfunction reveals secondary coenzyme Q deficiency in mammals |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Differential gene expression in mouse models of mitochondrial dysfunction
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| |
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| Overall design |
various mutants vs. wild type
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| Contributor(s) |
Kuhl I, Miranda M, Atanassov I, Kuznetsova I, Hinze Y, Mourier A, Filipovska A, Larsson N |
| Citation(s) |
29132502 |
| |
| Submission date |
Mar 12, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Irina Kuznetsova |
| E-mail(s) |
irina.kuznetsova@curtin.edu.au
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| Organization name |
Curtin University
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| Department |
The Centre for Crop and Disease Management
|
| Street address |
Building 304, Kent Street
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| City |
Bentley |
| State/province |
WA |
| ZIP/Postal code |
6102 |
| Country |
Australia |
| |
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| Platforms (1) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
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| Samples (40)
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| GSM2534737 |
Lrpprc (L/L, cre) rep4 |
| GSM2534738 |
Lrpprc (L/L) rep1 |
| GSM2534739 |
Lrpprc (L/L) rep2 |
| GSM2534740 |
Lrpprc (L/L) rep3 |
| GSM2534741 |
Lrpprc (L/L) rep4 |
| GSM2534742 |
Twinkle (L/L, cre) rep1 |
| GSM2534743 |
Twinkle (L/L, cre) rep2 |
| GSM2534744 |
Twinkle (L/L, cre) rep3 |
| GSM2534745 |
Twinkle (L/L) rep1 |
| GSM2534746 |
Twinkle (L/L) rep2 |
| GSM2534747 |
Twinkle (L/L) rep3 |
| GSM2534748 |
Twinkle (L/L) rep4 |
| GSM2534749 |
Twinkle (L/L) rep5 |
| GSM2534750 |
Polrmt (L/L, cre) rep1 |
| GSM2534751 |
Polrmt (L/L, cre) rep2 |
| GSM2534752 |
Polrmt (L/L, cre) rep3 |
| GSM2534753 |
Polrmt (L/L, cre) rep4 |
| GSM2534754 |
Polrmt (L/L) rep1 |
| GSM2534755 |
Polrmt (L/L) rep2 |
| GSM2534756 |
Polrmt (L/L) rep3 |
| GSM2534757 |
Polrmt (L/L) rep4 |
| GSM2534758 |
Mterf4 (L/L, cre) rep1 |
| GSM2534759 |
Mterf4 (L/L, cre) rep2 |
| GSM2534760 |
Mterf4 (L/L, cre) rep3 |
| GSM2534761 |
Mterf4 (L/L) rep1 |
| GSM2534762 |
Mterf4 (L/L) rep2 |
| GSM2534763 |
Mterf4 (L/L) rep3 |
| GSM2534764 |
Mterf4 (L/L) rep4 |
| GSM2534765 |
Mterf4 (L/L) rep5 |
| GSM2966305 |
Tfam (L/L, cre) rep1 |
| GSM2966306 |
Tfam (L/L, cre) rep2 |
| GSM2966307 |
Tfam (L/L, cre) rep3 |
| GSM2966308 |
Tfam (L/L, cre) rep4 |
| GSM2966309 |
Tfam (L/L, cre) rep5 |
| GSM2966310 |
Tfam (L/L) rep1 |
| GSM2966311 |
Tfam (L/L) rep2 |
| GSM2966312 |
Tfam (L/L) rep3 |
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| Relations |
| BioProject |
PRJNA378878 |
| SRA |
SRP101755 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE96518_DESeq2_results_lrpprc_strain.csv.gz |
1.3 Mb |
(ftp)(http) |
CSV |
| GSE96518_DESeq2_results_mterf4_strain.csv.gz |
1.3 Mb |
(ftp)(http) |
CSV |
| GSE96518_DESeq2_results_polrmt_strain.csv.gz |
1.4 Mb |
(ftp)(http) |
CSV |
| GSE96518_DESeq2_results_tfam_strain.csv.gz |
1.4 Mb |
(ftp)(http) |
CSV |
| GSE96518_DESeq2_results_twinkle_strain.csv.gz |
1.4 Mb |
(ftp)(http) |
CSV |
| GSE96518_gene_count_matrix_lrpprc_strain.csv.gz |
467.2 Kb |
(ftp)(http) |
CSV |
| GSE96518_gene_count_matrix_mterf4_strain.csv.gz |
467.2 Kb |
(ftp)(http) |
CSV |
| GSE96518_gene_count_matrix_polrmt_strain.csv.gz |
486.5 Kb |
(ftp)(http) |
CSV |
| GSE96518_gene_count_matrix_tfam_strain.csv.gz |
494.3 Kb |
(ftp)(http) |
CSV |
| GSE96518_gene_count_matrix_twinkle_strain.csv.gz |
482.7 Kb |
(ftp)(http) |
CSV |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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