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Series GSE96075 Query DataSets for GSE96075
Status Public on Jun 26, 2017
Title Zoledronic acid inhibits NFAT and IL-2 signaling pathways in regulatory T cells and diminishes their suppressive function in patients with metastatic cancer
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary In order to identify the processes altered in T regulatory cells (Treg) by Zoledronic acid (ZA), we examined RNA expression by RNA-seq in Treg treated with and without ZA. We identified gene expression alterations in ZA-treated Treg that were essential to Treg function.
 
Overall design Human T regulatory cells isolated from healthy donors (n=6) were cultured overnight with IL-2 and OKT3 (anti-CD3) in the presence or absence of ZA. RNA sequencing (Illumina HiSeq2500) was performed to identify differential gene expression induced by ZA treatment of Treg.
 
Contributor(s) Murray S, Sarhan D, Lundqvist A
Citation(s) 28920001
Submission date Mar 10, 2017
Last update date May 15, 2019
Contact name Anthony Griswold
E-mail(s) agriswold@med.miami.edu
Organization name University of Miami
Street address 1501 NW 10th Ave, BRB 318
City Miami
State/province FL
ZIP/Postal code 33136
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (12)
GSM2532810 Donor1_IL2OKT3
GSM2532811 Donor1_IL2OKT3ZA
GSM2532812 Donor2_IL2OKT3
Relations
BioProject PRJNA378764
SRA SRP101719

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE96075_RAW.tar 4.3 Mb (http)(custom) TAR (of TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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