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Series GSE95860 Query DataSets for GSE95860
Status Public on Jun 26, 2017
Title Expression data from fresh human embryonic lung epithelial tip and stalk cells and cultured organoids derived from tip and stalk.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We isolated the tip and stalk progenitors from four individual human embryonic lungs and used mRNAseq to profile their transcriptome. Tips and stalks from other individuals were subsequently cultured as organoids and their transcriptome profiled by mRNAseq in a separate sequencing run.
 
Overall design Lung epithelial tip and stalk cells were microdissected before being lysed for RNA extraction. Organoids were removed from Matrigel prior to lysis.
 
Contributor(s) Rawlins EL
Citation(s) 28665271
Submission date Mar 09, 2017
Last update date Sep 13, 2019
Contact name Charles Bradshaw
Organization name University of Cambridge
Department Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
 
Platforms (1)
GPL18460 Illumina HiSeq 1500 (Homo sapiens)
Samples (16)
GSM2527232 Microdissected fresh tip individual 1
GSM2527233 Microdissected fresh stalk individual 1
GSM2527234 Microdissected fresh tip individual 2
Relations
BioProject PRJNA378613
SRA SRP101626

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE95860_RAW.tar 4.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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