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Series GSE95474 Query DataSets for GSE95474
Status Public on Mar 01, 2017
Title Immunostimulatory endogenous nucleic acids drive the lesional inflammation in cutaneous lupus erythematosus
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Cutaneous lupus erythematosus (CLE) is a photosensitive autoimmune disease characterized by a strong type-I-interferon (IFN) associated inflammation. Keratinocytes are known to determine the interface-dermatitis-pattern in CLE by production of proinflammatory cytokines in the lower epidermis. These cytokines drive a cytotoxic anti-epithelial immune response resulting in keratinocytic cell death and release of endogenous nucleic acids (eNA). We hypothesized that these eNA (RNA- and DNA-motifs) have the capacity to activate innate immune pathways in keratinocytes via pathogen-recognition-receptors (PRR).
Gene expression analyses revealed an excessive activation of innate immune response pathways with strong expression of IFN-regulated cytokines in CLE skin lesions. Cultured keratinocytes produce large amounts of these cytokines in response to stimulation of PRR with eNA. UV-stimulation enhances the immunogenicity of eNA and induces CLE-like skin lesions in knockout mice lacking the cytosolic DNase TREX1.
Our results provide evidence for a pathogenetic role of endogenous nucleic acids in CLE. They are released within the cytotoxic inflammation along the dermo-epidermal junction and have the capacity to drive the LE-typical inflammation. UV-irradiation supports this inflammation by generation of highly immunostimulatory DNA motifs (8-OHG).
These findings explain the photosensitivity of lupus patients and identify pathways of the innate immune system as targets for future therapies.
 
Overall design Lesional skin biopsies were taken from patients with active, untreated lupus skin disease (Chronic discoid lupus erythematosus = CDLE, n=6; subacute cutaneous lupus erythematosus = SCLE, n=5). Healthy control (HC) specimens were obtained from healthy skin of 5 patients undergoing plastic surgery. In every case, two 4mm punch biopsies were taken. One was flash-frozen in liquid nitrogen and afterwards processed for mRNA isolation and gene expression analyses. The second biopsy was fixed in 5% formalin solution overnight, and was proceeded for histological investigation.
 
Contributor(s) Scholitissek B, Wenzel J
Citation(s) 28351661
Submission date Feb 28, 2017
Last update date Mar 27, 2018
Contact name Joerg Wenzel
E-mail(s) joerg.wenzel@ukb.uni-bonn.de
Organization name University of Bonn
Department Dermatology
Street address Sigmund Freud Str 25
City Bonn
ZIP/Postal code 53121
Country Germany
 
Platforms (1)
GPL16699 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
Samples (16)
GSM2514743 CDLE_1
GSM2514744 CDLE_2
GSM2514745 CDLE_3
Relations
BioProject PRJNA377232

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE95474_RAW.tar 197.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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