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| Status |
Public on Oct 31, 2017 |
| Title |
Expression data of iPSCs, CTraS-iPSCs, embryoid bodies, and their derived neurospheres |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
Recent studies indicated that the differentiation tendency of pluripotent stem cells (PSCs) was affected by a certain small molecule treatment. We found the combination of small molecules that bringed out the differentiation potentials of PSCs, and defined such state of PSC as CTraS.
Then, we used microarrays to detail the global programme of gene expression reflecting the effect of CTraS, and carefully compared the characteristics of iPSCs, CTraS-iPSCs, embryoid bodies (EBs), and their derived neurospheres (NSs) based on their expression profiles .
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| Overall design |
We isolated RNA from iPSCs, CTraS-iPSCs, EBs, and NSs derived from them (total 10 samples) for the gene expression microarray analysis. All of the iPSC lines we used were low passage number (less than 15).
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| Contributor(s) |
Fujimori K, Matsumoto T, Okano H, Akamatsu W |
| Citation(s) |
29107593 |
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| Submission date |
Feb 23, 2017 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Koki Fujimori |
| E-mail(s) |
koh0909@a3.keio.jp
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| Organization name |
Keio University
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| Department |
Physiology
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| Street address |
35 Shinanomachi
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| City |
Sinjuku-ku, Tokyo |
| ZIP/Postal code |
160-8582 |
| Country |
Japan |
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| Platforms (1) |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
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| Samples (10)
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| Relations |
| BioProject |
PRJNA376525 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE95271_All_entities.xlsx |
12.7 Mb |
(ftp)(http) |
XLSX |
| GSE95271_RAW.tar |
44.4 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
| Processed data are available on Series record |
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