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Series GSE95165 Query DataSets for GSE95165
Status Public on Aug 16, 2019
Title LSD1 maintains mammary luminal cell differentiation and suppresses luminal breast cancer cell invasion
Organism Homo sapiens
Experiment type Expression profiling by array
Summary LSD1 (KDM1A) is a histone demethylase that plays both oncogenic and tumor suppressor roles in breast cancer. However, the exact contexts under which it plays these opposite roles remain largely elusive. By characterizing its role in normal and cancerous luminal mammary epithelial cells (MECs), here we show that LSD1 is essential for maintaining differentiation and survival of luminal cells. LSD1-inhibition by both genetic and pharmacological approaches increases invasion of luminal breast cancer cells. Mechanistically, we find LSD1 interacts with GATA3 and their common target genes are highly related to breast cancer. LSD1 positively regulates GATA3 expression and represses that of TRIM37, a histone H2A ubiquitin ligase and breast cancer oncoprotein. LSD1-loss leads to reduced expression of several cell junction genes (e.g., CDH1, VCL, CTNNA1), possibly via TRIM37-mediated repression. Collectively, our data suggest LSD1 largely plays a tumor suppressor role in luminal breast cancer and the increased MEC invasiveness associated with LSD1-inhibition can be blocked via TRIM37-inhibition.
 
Overall design Total RNA obtained from MCF7 cells treated with either LSD1 siRNA, or GATA3 siRNA, or ESR1 siRNA compared to that from MCF7 cells treated with nonspecific control siRNA.
 
Contributor(s) Hu X, Li Z
Citation(s) 31409898
Submission date Feb 22, 2017
Last update date Aug 18, 2019
Contact name Zhe Li
E-mail(s) zli4@rics.bwh.harvard.edu
Organization name Brigham and Women's Hospital
Department Medicine, Genetics Division
Lab Li Lab
Street address 77 Avenue Louis Pasteur, Room 466
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (12)
GSM2498124 MCF7 cells control siRNA, replicate 1
GSM2498125 MCF7 cells control siRNA, replicate 2
GSM2498126 MCF7 cells control siRNA, replicate 3
Relations
BioProject PRJNA376261

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE95165_RAW.tar 26.2 Mb (http)(custom) TAR
GSE95165_non-normalized.txt.gz 3.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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