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Series GSE94840 Query DataSets for GSE94840
Status Public on Jun 09, 2017
Title ALOX5 exhibits anti-tumor and drug-sensitizing effects in MLL-rearranged leukemia
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary MLL-rearranged acute myeloid leukemia (AML) remains a fatal disease with a high rate of relapse and therapeutic failure due to chemotherapy resistance. In analysis of our Affymetrix microarray profiling of human AML and normal control samples, we found that ALOX5 is especially down-regulated in MLL-rearranged AML. Our colony forming/replating and bone marrow transplantation (BMT) assays showed that Alox5 exhibited a moderate anti-tumor effect both in vitro and in vivo. Strikingly, leukemic cells with Alox5 overexpression showed a significantly higher sensitivity to the standard chemotherapeutic agents, i.e., doxorubicin (DOX) and cytarabine (Ara-C). The drug-sensitizing role of Alox5 was further confirmed in human and murine MLL-rearranged AML cell models in vitro, as well as in the in vivo MLL-rearranged AML BMT model coupled with treatment of “5+3” (i.e. DOX plus Ara-C) regimen. Our RNA-seq analysis showed that Stat and K-Ras signaling pathways were negatively correlated with Alox5 overexpression in MLL-AF9-leukemic blast cells, implying targeting those pathways likely contributes to Alox5’s functions. Collectively, our work shows that ALOX5 plays a moderate anti-tumor role and functions as a drug sensitizer, with a therapeutic potential, in MLL-rearranged AML.
 
Overall design To delineate the potential molecular mechanism underlying the anti-tumor and drug-sensitizing effects of Alox5, we performed RNA sequencing (RNA-seq) of two pairs (4 samples) of mouse BM leukemic blast cells collected from the MA9_Ctrl and MA9_Alox5 mice in secondary BMT assays.
 
Contributor(s) Chen J, Dong L
Citation(s) 28500307
Submission date Feb 13, 2017
Last update date May 15, 2019
Contact name Jianjun Chen
E-mail(s) jianchen@coh.org
Phone 6262185591
Organization name Beckman Research Institute of City of Hope
Department Systems Biology
Lab Chen Lab
Street address 1218 S. 5th Ave., Room 2062
City Monrovia
State/province CA
ZIP/Postal code 91016
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (4)
GSM2486371 MA9+Ctrl_rep1
GSM2486372 MA9+Alox5_rep1
GSM2486373 MA9+Ctrl_rep2
Relations
BioProject PRJNA374555
SRA SRP099451

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE94840_Alox5_vs_Control.all.gene.result.txt.gz 1.5 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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