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Series GSE94581 Query DataSets for GSE94581
Status Public on Mar 15, 2017
Title Lymphocyte Activation Gene-3 limits regulatory T cell proliferation and function in autoimmune diabetes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Inhibitory receptors (Irs) are pivotal in controlling T cell homeostasis because of their intrinsic regulation of conventional T (Tconv) cell proliferation, viability and function. However, the role of Irs on regulatory T (Treg) cells remains obscure, as they could be required for suppressive activity and/or limit Treg cell function. We evaluated the role of Lymphocyte Activation Gene-3 (LAG3, CD223) on Treg cells by generating mice in which LAG3 is absent on the cell surface of Treg cells in a murine model of Type 1 Diabetes. Surprisingly, mice that lacked LAG3 expression on Treg cells exhibited reduced autoimmune diabetes, consistent with enhanced Treg cell proliferation and function. Whereas the transcriptional landscape of peripheral wild-type (WT) and Lag3-deficient Treg cells was largely comparable, substantial differences between intra-islet Treg cells were evident and involved a subset of genes and pathways that promote Treg cell maintenance and function. Consistent with these observations, Lag3-deficient Treg cells out-competed WT Treg cells in the islets but not in the periphery in co-transfer experiments due to enhanced IL2-Stat5 signaling and Eos expression. Our study suggests that LAG3 intrinsically limits Treg cell proliferation and function at inflamed pancreas, promotes autoimmunity in a chronic autoimmune-prone environment and may contribute to Treg cell insufficiency in autoimmune disease
 
Overall design Wt and Lag3 deficient Tregs from islets and non-draining lymph nodes NDLN in an autoimmune diabetes model.
 
Contributor(s) Chikina M
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Submission date Feb 06, 2017
Last update date May 15, 2019
Contact name Maria Chikina
E-mail(s) mchikina@gmail.com
Organization name University of Pittsburgh
Street address 3501 5th ave
City Pittsburgh
State/province PA
ZIP/Postal code 15260
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (12)
GSM2478776 Lag3_islet.1
GSM2478777 Lag3_islet.2
GSM2478778 Wt_islet.1
Relations
BioProject PRJNA371501
SRA SRP098941

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE94581_Counts.txt.gz 361.1 Kb (ftp)(http) TXT
GSE94581_CountsNfilt.txt.gz 1015.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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