|
| Status |
Public on Sep 01, 2020 |
| Title |
LSD1/KDM1A Maintains Genome-wide Homeostasis of Transcriptional Enhancers [RNA-Seq] |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We performed sequencing of Nuclear RNA from Lsd1-WT, Lsd1-GT, KDM5c-WT, and KDM5C-KO mouse embryonic stem cells (mES). We also performed sequencing of Total RNA from Lsd1-WT and Lsd1-GT mES.
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| |
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| Overall design |
We performed RNA-Seq in technical duplicates. Nuclei were isolated as described in PMID:21572438 with minor modifications.
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| |
|
| Contributor(s) |
Agarwal S, Iwase S |
| Citation(s) |
33414108 |
| |
| Submission date |
Feb 06, 2017 |
| Last update date |
Jun 03, 2024 |
| Contact name |
Shigeki Iwase |
| E-mail(s) |
siwase@umich.edu
|
| Organization name |
University of Michigan
|
| Street address |
1241 E. Catherine St.
|
| City |
Ann Arbor |
| ZIP/Postal code |
48108 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (12)
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| This SubSeries is part of SuperSeries: |
| GSE93952 |
LSD1/KDM1A Maintains Genome-wide Homeostasis of Transcriptional Enhancers |
|
| Relations |
| BioProject |
PRJNA371467 |
| SRA |
SRP098912 |
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