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Series GSE94549 Query DataSets for GSE94549
Status Public on Jun 27, 2017
Title Effect of MDK expressing Melanoma cells conditioned media in Human LEC
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Gene expression analysis in hLECs treated with gain of function or loss of function of MDK in human melanoma cells.
 
Overall design Biological triplicates of hLEC treated for 3 days with EGM-2 MV conditioned media of melanoma cells. Cell line SK-Mel-147 KD for MDK (shMDK) and its corresponding control (shCtrl (LoF) and WM164 cell line overexpressing MDK (MDK) or an empty vector (NEG) (GoF) were used to produce the conditioned media.
 
Contributor(s) Olmeda D, Graña O, Soengas MS
Citation(s) 28658220
Submission date Feb 06, 2017
Last update date May 15, 2019
Contact name David Olmeda
E-mail(s) dolmeda@cnio.es
Organization name CNIO
Department Molecular Oncology
Lab Melanoma
Street address Melchor Fernandez Almagro 3
City Madrid
State/province Madrid
ZIP/Postal code 28050
Country Spain
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (15)
GSM2478013 LECS_CM_10_sHC_1
GSM2478014 LECS_CM_10_sHC_2
GSM2478015 LECS_CM_10_sHC_3
Relations
BioProject PRJNA371460
SRA SRP098905

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE94549_Genes.FPKM.table.txt.gz 999.4 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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