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Series GSE94482 Query DataSets for GSE94482
Status Public on Mar 13, 2017
Title Identification of intrinsic growth modulators for intact CNS neurons after injury
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Functional deficits persist after spinal cord injury (SCI) because axons in the adult mammalian central nervous system (CNS) fail to regenerate. However, modest levels of spontaneous functional recovery are typically observed after trauma, and are thought to be mediated by the plasticity of intact circuits. The mechanisms underlying intact circuit plasticity are not delineated. Here, we characterize the in vivo transcriptome of sprouting intact neurons from ngr1 null mice after partial SCI. We identify the lysophosphatidic acid signaling modulators Lppr1 and Lpar1 as intrinsic axon growth modulators for intact corticospinal motor neurons after adjacent injury. Furthermore, in vivo Lpar1 inhibition or Lppr1 overexpression enhances sprouting of intact corticospinal tract axons and yields greater functional recovery after unilateral brainstem lesion in wild type mice. Thus, the transcriptional profile of injury-induced sprouting of intact neurons reveals targets for therapeutic enhancement of axon growth initiation and new synapse formation.
 
Overall design GFP labeled Corticospinal motor neurons (CSMNs) were harvetsed via laser capture microdissection to assess gene expression between populations that were quiescent and those that initated a functional axon growth response.
 
Contributor(s) Cafferty WB, Lopez-Giraldez F
Citation(s) 28297672
Submission date Feb 03, 2017
Last update date May 15, 2019
Contact name Francesc Lopez
E-mail(s) francesc.lopez@yale.edu
Organization name Yale University
Department Department of Genetics
Lab YCGA
Street address P.O. Box 27386
City West Haven
State/province CT
ZIP/Postal code 06516
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (21)
GSM2476285 WT_crym1
GSM2476286 WT_crym2
GSM2476287 WT_crym3
Relations
BioProject PRJNA369825
SRA SRP098816

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Supplementary file Size Download File type/resource
GSE94482_gene_exp.diff.gz 16.6 Mb (ftp)(http) DIFF
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Raw data are available in SRA
Processed data are available on Series record

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