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Series GSE94343 Query DataSets for GSE94343
Status Public on Feb 14, 2018
Title ATF4 inhibition by p62 represses stromal metabolic reprogramming and tumorigenesis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Tumors often undergo stress and need to reprogram their metabolism to survive and grow under nutrient challenging conditions. The stroma could play a critical role in this process by providing nutrients or signals to support the epithelial compartment of the tumor. Autophagy has been shown to play key roles both in the stroma and in the epithelium. However, how autophagy adaptors, such as p62, participate in the mechanisms whereby the stroma supports tumor progression is not yet fully understood. Here we show that p62 deficiency in stromal fibroblasts promotes resistance to glutamine deprivation through a metabolic reprogramming orchestrated by the direct control of ATF4 stability by p62-mediated polyubiquitination. This, in turn, activates the flux of glucose carbons through a pyruvate carboxylase-asparagine synthase cascade that results in asparagine-mediated stromal cell growth and tumor epithelial proliferation, independent of autophagy. This supports a new model in which p62 directly targets nuclear transcription factors to control metabolic reprograming in the microenvironment to repress tumorigenesis, and emerges as global tumor suppressor.
 
Overall design 52 weeks old p62f/f and p62fspKO prostates were harvested and snap-frozen in dry ice.
 
Contributor(s) Linares JF, Cordes T, Duran A, Reina-Campos M, Castilla EA, Moscat J, Metallo CM, Diaz-Meco MT
Citation(s) 28988820
Submission date Jan 31, 2017
Last update date Jul 07, 2022
Contact name Jorge Moscat
E-mail(s) jom4010@med.cornell.edu
Organization name WEILL CORNELL MEDICINE
Department Pathology and Laboratory Medicine
Lab Moscat and Diaz-Meco
Street address 1188 York Avenue
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (6)
GSM2473509 13_p62ff_135
GSM2473510 14_p62ff_134
GSM2473511 15_p62ff_203
Relations
BioProject PRJNA369409
SRA SRP098654

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE94343_Processed_data_file_RNASeq_p62FSP1KO.xlsx 1.1 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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