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Series GSE93924 Query DataSets for GSE93924
Status Public on Jan 24, 2017
Title Heterochromatin Protein 1γ Regulates Epigenetic Reprogramming in Primordial Germ Cells
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Temporal and spatial regulation of trimethylation of histone H3 lysine27 (H3K27me3) is crucial for cell lineage commitment and development. Resetting the ground state of H3K27me3 is important for establishing a proper development program of primordial germ cells (PGCs). The mechanisms that regulate global erasure of epigenetic information in the germ line are not well understood. Here we show that HP1γ suppresses the demethylation activity of Utx through direct interaction in vitro and in vivo. Down-regulation of mammalian heterochromatin protein 1 gamma (HP1γ) coincides with transient loss of H3K27me3 in PGCs on Embryonic Day 10.5 (E10.5). Furthermore, transient abolishment of HP1γ promotes the induction of embryonic stem cells into putative PGCs in vitro. These data reveal a cross-talk between HP1γ and Utx in controlling histone H3K27 methylation status, thereby define HP1γ as a molecular regulator of germ cell epigenetic reprogramming.
 
Overall design Examination of H3K27me3 modification and HP1γ in HP1γ-depleted mouse ESCs.
 
Contributor(s) Xiong F, Zhang T, Mei P
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Submission date Jan 23, 2017
Last update date May 15, 2019
Contact name Pinchao Mei
E-mail(s) 1489079201@qq.com
Phone 86-01-69156446
Organization name Peking Union Medical College & Chinese Academy of Medical Science
Department Dept. Biochem & Mol Biol
Lab 621
Street address Dongdansantiao 5hao
City Beijing
ZIP/Postal code 10005
Country China
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (5)
GSM2465049 H3K27me3_ChIPSeq_siGFP
GSM2465050 H3K27me3_ChIPSeq_siHP1γ
GSM2465051 HP1g_ChIPSeq_siGFP
Relations
BioProject PRJNA362847
SRA SRP097604

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE93924_RAW.tar 1.6 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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