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Series GSE93796 Query DataSets for GSE93796
Status Public on Sep 24, 2017
Title mRNA-Seq of the CA1 hippocampal subregion from 3 month old animals injected with JQ1 (50mg/kg) i.p. and mRNA-Seq of CA1 of 8-10 month old APP/PS1-21 transgenic animals injected with JQ1 (50mg/kg) i.p.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Histone acetylation is essential for memory formation and provides a drug target to treat dementia. The histone acetylation landscape is shaped by chromatin writer and eraser proteins. In contrast, little is known about the neural activity of chromatin readers that link chromatin state to cellular function. Here, we tested the effect of JQ1 – a small molecule inhibitor of the chromatin readers BRD2, BRD3, BRD4 and BRDT – on associative and spatial memory tasks and on synaptic plasticity and found that it is able to enhance cognitive performance and long-term potentiation in wildtype animals and in a mouse model for amyloid deposition. JQ1 elicited a hippocampal gene expression program associated with ion channel activity, transcription and DNA repair. Our findings suggest that JQ1 could be used as a therapy against dementia and should be further tested in the context of learning and memory.
 
Overall design mRNA profile from the CA1 hippocampal subregion from adult (3 month old) WT and aged (8-10 month old) APP/PS1-21 animals treated with 50mg/kg JQ1 i.p. for 10-13 days
 
Contributor(s) Benito-Garagorri E, Fischer A
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Submission date Jan 18, 2017
Last update date May 15, 2019
Contact name Eva Benito Garagorri
E-mail(s) eva.benito@dzne.de
Organization name DZNE Goettingen
Department Epigenetics of Aging
Lab Andre Fischer
Street address Von Siebold Strasse 3A
City Goettingen
State/province Niedersachsen
ZIP/Postal code 37075
Country Germany
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (33)
GSM2462199 APP_jq1_mm_rna_sr_1
GSM2462200 APP_jq1_mm_rna_sr_2
GSM2462201 APP_jq1_mm_rna_sr_3
Relations
BioProject PRJNA362358
SRA SRP096977

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE93796_RAW.tar 14.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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