NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE93729 Query DataSets for GSE93729
Status Public on Jan 01, 2018
Title Extensive Functional Redundancy of Mammalian Enhancers [RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Analysis of the transcriptional changes in the limb resulting from the loss Gli3 limb enhancers
 
Overall design Forelimbs were dissected from wild-type, single and double and enhancer-null embryos and processed for RNA-seq analysis.
 
Contributor(s) Yuzawa Y, Osterwalder M
Citation(s) 29420474
Submission date Jan 17, 2017
Last update date May 15, 2019
Contact name Diane Dickel
Organization name Lawrence Berkeley National Laboratory
Lab mammalian functional genomics laboratory
Street address 1 Cyclotron Road
City Berkeley
State/province CA
ZIP/Postal code 94720
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (16)
GSM2461165 Wt_replicate_01_RNA-seq
GSM2461166 Wt_replicate_02_RNA-seq
GSM2461167 mm1179KO_replicate_01_RNA-seq
This SubSeries is part of SuperSeries:
GSE93730 Extensive Functional Redundancy of Mammalian Enhancers
Relations
BioProject PRJNA362218
SRA SRP096904

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE93729_RAW.tar 12.5 Mb (http)(custom) TAR (of FPKM_TRACKING)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap