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Series GSE93514 Query DataSets for GSE93514
Status Public on Jun 05, 2018
Title MACROD2 haploinsufficiency promotes chromosome instability and growth of intestinal tumors
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA-Seq data from intestinal tumors of ApcMin/+/Macrod2-/-,ApcMin/+/Macrod2-/+ and ApcMin/+/Macrod2+/+ mice (6 tumors per group)
 
Overall design Examine mRNA expression level changes between tumors by Macrod2 genotype
 
Contributor(s) Sieber OM
Citation(s) 29880585
Submission date Jan 11, 2017
Last update date May 15, 2019
Contact name Oliver Sieber
Organization name Walter and Eliza Hall Insitute of Medical Reseach
Street address 1G Royal Parade
City Parkville
State/province VIC
ZIP/Postal code 3052
Country Australia
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (18)
GSM2453584 Tumor from ApcMin/+/Macrod2-/+ mouse_1
GSM2453585 Tumor from ApcMin/+/Macrod2-/- mouse_1
GSM2453586 Tumor from ApcMin/+/Macrod2+/+ mouse_1
Relations
BioProject PRJNA360971
SRA SRP096580

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE93514_all_gene_counts.table.txt.gz 638.9 Kb (ftp)(http) TXT
GSE93514_all_gene_rpkm.tmm.table.txt.gz 1.8 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
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