|
| Status |
Public on Jan 09, 2017 |
| Title |
Gene expression changes after LOC550643 silencing |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Differential analysis of gene expression in HEK293T cells treated with a pool of siRNA targeting LOC550643, or non-silencing siRNA.
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| |
|
| Overall design |
LOC550643 encodes a polypeptide that binds to EDC4, and therefore may regulate RNA decay. This experiment tests whether steady-state gene expression levels are different in HEK293T cells treated with non-silencing siRNA, or with siRNA targeting LOC550643, by performing differential expression analysis of total RNA from both of these samples (triplicates of each).
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| |
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| Contributor(s) |
Slavoff S, Khitun A |
| Citation missing |
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| |
| Submission date |
Jan 08, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Sarah A Slavoff |
| E-mail(s) |
sarah.slavoff@yale.edu
|
| Phone |
2037378670
|
| Organization name |
Yale University- West Campus
|
| Department |
Chemistry
|
| Lab |
Slavoff Lab
|
| Street address |
Yale University West Campus-Building 600
|
| City |
West Haven |
| State/province |
Connecticut |
| ZIP/Postal code |
06516 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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| Samples (6)
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|
| Relations |
| BioProject |
PRJNA360533 |
| SRA |
SRP096253 |
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