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Series GSE93261 Query DataSets for GSE93261
Status Public on Feb 19, 2018
Title Transcriptome analysis of Follicular Lymphomas from the PRIMABIO cohort
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We investigated the biological features of FL and their relationship to patients’ outcome. Gene expression analysis was carried out on diagnosis biopsies from 148 follicular lymphoma patients enrolled in the PRIMA clinical trial. We developed a gene expression-based predictor of progression-free survival (PFS) in high-tumour burden FL patients and we analysed gene-expression signatures reflecting different aspects of tumour biology for their association with outcome. proposition SH: We investigated the biological features of FL and their relationship to patients’ outcome. Gene expression analysis was carried out on diagnosis biopsies from 148 follicular lymphoma patients enrolled in the PRIMA clinical trial. We developed a gene expression-based predictor of progression-free survival (PFS) in high-tumour burden FL patients and we analysed gene-expression signatures reflecting different aspects of tumour biology for their association with outcome.
 
Overall design Fresh-frozen tissue tumour biopsies were prospectively obtained from untreated FL patients participating in the international phase 3 PRIMA trial that evaluated rituximab maintenance after chemotherapy and rituximab induction (NCT00140582). Gene-expression profiling was performed using Affymetrix U133 Plus 2.0 micro-array. These data were used to identify a gene expression signature predicting early relapse in a supervised analysis. An unsupervised analysis was performed to identify the main components of transcriptional heterogeneity among follicular lymphoma tumours.
 
Contributor(s) Huet S, Tesson B, Salles G
Citation(s) 29475724
Submission date Jan 06, 2017
Last update date Mar 25, 2019
Contact name Bruno Tesson
Organization name Institut Carnot CALYM
Department Bioinformatics
Street address Centre Hospitalier Lyon-Sud Secteur Sainte Eugénie - Pavillon 6D
City Pierre Bénite
ZIP/Postal code 69495
Country France
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (149)
GSM2449240 prima600012 Follicular Lymphoma
GSM2449241 prima600015 Follicular Lymphoma
GSM2449242 prima600021 Follicular Lymphoma
Relations
BioProject PRJNA360433

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE93261_RAW.tar 665.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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