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Series GSE92597 Query DataSets for GSE92597
Status Public on Jan 22, 2017
Title Aire, guardian of immunological tolerance, binds to and activates super-enhancers [ChIP-seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq profile of Aire and partners in MECs
Overall design DAPI-CD45-Ly51loMHCIIhi MECs were single sorted and ChIP-seq profiling was perfomed. For ChIP-seq data analysis Illumina output single-end reads were trimmed to 50bp.
Contributor(s) Bansal K, Mathis D, Benoist C
Citation(s) 28135252
Submission date Dec 19, 2016
Last update date May 15, 2019
Contact name CBDM Lab
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
Platforms (3)
GPL16417 Illumina MiSeq (Mus musculus)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (23)
GSM2433214 WT_H3K4me1_rep_1
GSM2433215 WT_H3K4me1_rep_2
GSM2433216 WT_H3K27me3_rep_1
This SubSeries is part of SuperSeries:
GSE92654 Aire, guardian of immunological tolerance, binds to and activates super-enhancers
BioProject PRJNA358240
SRA SRP095423

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE92597_RAW.tar 2.0 Gb (http)(custom) TAR (of BIGWIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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