|
| Status |
Public on Jan 22, 2017 |
| Title |
Aire, guardian of immunological tolerance, binds to and activates super-enhancers [ChIP-seq] |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
ChIP-seq profile of Aire and partners in MECs
|
| |
|
| Overall design |
DAPI-CD45-Ly51loMHCIIhi MECs were single sorted and ChIP-seq profiling was perfomed. For ChIP-seq data analysis Illumina output single-end reads were trimmed to 50bp.
|
| |
|
| Contributor(s) |
Bansal K, Mathis D, Benoist C |
| Citation(s) |
28135252 |
| |
| Submission date |
Dec 19, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
CBDM Lab |
| E-mail(s) |
cbdm@hms.harvard.edu
|
| Phone |
617-432-7747
|
| Organization name |
Harvard Medical School
|
| Department |
Microbiology and Immunobiology
|
| Lab |
CBDM
|
| Street address |
77 Avenue Louis Pasteur
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02215 |
| Country |
USA |
| |
|
| Platforms (3) |
| GPL16417 |
Illumina MiSeq (Mus musculus) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (23)
|
|
| This SubSeries is part of SuperSeries: |
| GSE92654 |
Aire, guardian of immunological tolerance, binds to and activates super-enhancers |
|
| Relations |
| BioProject |
PRJNA358240 |
| SRA |
SRP095423 |
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