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Series GSE92247 Query DataSets for GSE92247
Status Public on Dec 13, 2016
Title Neonatal Transplantation Confers Maturation of PSC-Derived Cardiomyocytes Conducive to Modeling Cardiomyopathy
Organisms Mus musculus; Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Pluripotent stem cell-derived cardiomyocytes (PSC-CMs) were transplanted into rats for one month to determine the change in morphology, structure, and function. Single cell RNA seq analysis was performed to compared the transcriptome of in vivo matured PSC-CMs to adult rat cardiomyocytes and in vitro cultured PSC-CMs.
 
Overall design single cell RNA seq of 3 cell types
 
Contributor(s) Chulan K, Gunsik C
Citation(s) 28076798
Submission date Dec 12, 2016
Last update date May 15, 2019
Contact name Chulan Kwon
E-mail(s) ckwon13@jhmi.edu
Organization name Johns Hopkins University
Department Medicine, Cardiology, Heart & Vascular Institute, Institute for Cell Engineering, and Cellular and Molecular Medicine
Street address 720 Rutland Ave, Ross 954
City Baltimore
State/province MD
ZIP/Postal code 21042
Country USA
 
Platforms (2)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL20084 Illumina NextSeq 500 (Rattus norvegicus)
Samples (24)
GSM2424389 Adult rat cardiomyocyte [adult_A]
GSM2424390 Adult rat cardiomyocyte [adult_B]
GSM2424391 Adult rat cardiomyocyte [adult_C]
Relations
BioProject PRJNA357025
SRA SRP094929

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Supplementary file Size Download File type/resource
GSE92247_rawcounts.csv.gz 94.2 Kb (ftp)(http) CSV
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Processed data are available on Series record
Raw data are available in SRA
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