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Series GSE91427

Query DataSets for GSE91427

Status

Public on Jan 03, 2017

Title

ChIP-seq from K562 (ENCSR033VAZ)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

TARDBP ChIP-seq on human K562

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR033VAZ/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Dec 11, 2016

Last update date

May 15, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL11154

Illumina HiSeq 2000 (Homo sapiens)

Samples (2)

GSM2422915	ChIP-seq from K562 (ENCLB224WPQ)
GSM2422916	ChIP-seq from K562 (ENCLB166HWY)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE91427_ENCFF088QFX_peaks_hg19.bigBed	12.6 Mb	(ftp)(http)	BIGBED
GSE91427_ENCFF098QMC_fold_change_over_control_GRCh38.bigWig	2.2 Gb	(ftp)(http)	BIGWIG
GSE91427_ENCFF235UZG_conservative_idr_thresholded_peaks_hg19.bed.gz	150.1 Kb	(ftp)(http)	BED
GSE91427_ENCFF261XPP_optimal_idr_thresholded_peaks_hg19.bed.gz	236.5 Kb	(ftp)(http)	BED
GSE91427_ENCFF289JBE_peaks_GRCh38.bigBed	12.6 Mb	(ftp)(http)	BIGBED
GSE91427_ENCFF305FZG_fold_change_over_control_hg19.bigWig	2.2 Gb	(ftp)(http)	BIGWIG
GSE91427_ENCFF361XVV_conservative_idr_thresholded_peaks_hg19.bigBed	363.1 Kb	(ftp)(http)	BIGBED
GSE91427_ENCFF492SEP_optimal_idr_thresholded_peaks_GRCh38.bigBed	514.1 Kb	(ftp)(http)	BIGBED
GSE91427_ENCFF518HIX_signal_p-value_GRCh38.bigWig	1.8 Gb	(ftp)(http)	BIGWIG
GSE91427_ENCFF519FSN_optimal_idr_thresholded_peaks_hg19.bigBed	514.1 Kb	(ftp)(http)	BIGBED
GSE91427_ENCFF522JFX_conservative_idr_thresholded_peaks_GRCh38.bigBed	367.1 Kb	(ftp)(http)	BIGBED
GSE91427_ENCFF612BYB_peaks_hg19.bed.gz	6.9 Mb	(ftp)(http)	BED
GSE91427_ENCFF617JTC_peaks_GRCh38.bed.gz	6.9 Mb	(ftp)(http)	BED
GSE91427_ENCFF909RMQ_optimal_idr_thresholded_peaks_GRCh38.bed.gz	234.4 Kb	(ftp)(http)	BED
GSE91427_ENCFF922XNG_signal_p-value_hg19.bigWig	1.7 Gb	(ftp)(http)	BIGWIG
GSE91427_ENCFF937LGS_conservative_idr_thresholded_peaks_GRCh38.bed.gz	150.7 Kb	(ftp)(http)	BED
GSE91427_RAW.tar	10.2 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run Selector
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record