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Series GSE90926 Query DataSets for GSE90926
Status Public on Jun 20, 2017
Title TCF7L1 knockdown in pancreatic cancer
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNAi mediated depletion of TCF7L1 increases activity of a Wnt-based reporter and imparts more aggressive tumor phenotypes in vitro in pancreatic cancer cell lines that express TCF7L1. We sought to determine what changes in transcription ocurred after RNAi mediated knockdown of TCF7L1 in these cells by RNA-sequencing
Overall design 12 samples, 4 different conditions with 3 replicates each
Contributor(s) David D, Kathleen K
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Submission date Dec 06, 2016
Last update date May 15, 2019
Contact name David Dawson
Organization name UCLA
Department Pathology
Lab Dawson
Street address 650 Charles E Young Dr South
City Los Angeles
State/province California
ZIP/Postal code 90095
Country USA
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (12)
GSM2417574 MIA CTRL 1
GSM2417575 MIA CTRL 2
GSM2417576 MIA CTRL 3
BioProject PRJNA356377
SRA SRP094619

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE90926_RAW.tar 6.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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