NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE90891 Query DataSets for GSE90891
Status Public on Feb 24, 2017
Title Rb and p53 cooperate to suppress prostate cancer lineage plasticity, metastasis, and antiandrogen resistance
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Prostate cancer relapsing from antiandrogen therapies can exhibit variant histology with altered lineage marker expression, suggesting lineage plasticity facilitates therapeutic resistance. Mechanisms underlying prostate cancer lineage plasticity are unknown, and relevant experimental models are needed. We demonstrate Rb1 loss facilitates lineage plasticity and metastasis of prostate adenocarcinoma initiated by Pten mutation in the mouse. Additional loss of Trp53 causes resistance to antiandrogen therapy. Gene expression profiling indicates mouse tumors are comparable to human prostate cancer neuroendocrine variants; both mouse and human tumors exhibit increased expression of epigenetic reprogramming factors like Ezh2 and Sox2. Clinically relevant Ezh2 inhibitors restore androgen receptor expression and sensitivity to antiandrogen therapy. These findings uncover genetic mutations enabling prostate cancer progression, identify mouse models for studying prostate cancer lineage plasticity, and suggest an epigenetic approach for extending clinical responses to antiandrogen therapy.
 
Overall design 27 mouse samples; 4 wild type and 23 with floxed alleles. The purpose of the experiment was to compare the gene expression profile of prostate tumors from mice with different genotypes. The genotypes compared include PBCre4:Ptenfl/fl, PBCre4:Ptenfl/fl:Rb1fl/fl, and PBCre4:Ptenfl/fl:Rb1fl/fl:Trp53fl/fl where fl=floxed alleles of the indicated genes. Tumors, either primary or metastatic, from individual mice were dissected, RNA extracted, and RNA analyzed by RNA-seq. Castrate recurrent tumors were dissected from mice that had been surgically castrated at 30 weeks of age, and tumors collected at relapse as mice became moribund.
 
Contributor(s) Ku SY, Rosario S, Wang Y, Mu P, Seshadri M, Goodrich ZW, Goodrich MM, Labbe DP, Cortes E, Wang J, Long HW, Xu B, Brown M, Loda M, Sawyers CL, Ellis L, Goodrich DW
Citation(s) 28059767, 33481853, 37875657
Submission date Dec 05, 2016
Last update date Jan 16, 2024
Contact name David W Goodrich
E-mail(s) david.goodrich@roswellpark.org
Phone 7168454506
Fax 7168458857
Organization name Roswell Park Cancer Institute
Department Pharmacology&Therapeutics
Street address Elm and Carlton
City Buffalo
State/province NY
ZIP/Postal code 14263
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (27)
GSM2417041 WT_PRO1
GSM2417042 WT_PRO2
GSM2417043 WT_PRO3
Relations
BioProject PRJNA356285
SRA SRP094570

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE90891_RPKMedgeR.csv.gz 4.0 Mb (ftp)(http) CSV
GSE90891_RawCounts.csv.gz 963.6 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap