|
| Status |
Public on May 29, 2018 |
| Title |
Enhancer chromatin mark H3K27ac in hematopoietic stem and progenitor cells [ChIP-seq] |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We mapped H3K27ac chromatin mark of 4 types of adult hematopoietic stem and progenitor cells sorted from wildtype C57BL/6 mice.
|
| |
|
| Overall design |
Maps of enhancer chromatin mark H3K27ac in hematopoietic stem and progenitor cells were obtained by sequencing on Illumina HiSeq 2500
|
| |
|
| Contributor(s) |
Qian P, Li L, Gogol M |
| Citation(s) |
29727682 |
| |
| Submission date |
Nov 03, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Madelaine Gogol |
| Organization name |
Stowers Institute
|
| Department |
Computational Biology Core
|
| Street address |
1000 E. 50th Street
|
| City |
Kansas City |
| State/province |
MO |
| ZIP/Postal code |
64110 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
| Samples (8)
|
| GSM2373835 |
H3K27 acetylation ChIP, long-term hematopoietic stem cell |
| GSM2373837 |
H3K27 acetylation ChIP, intermediate-term hematopoietic stem cell |
| GSM2373841 |
H3K27 acetylation ChIP, short-term hematopoetic stem cell |
| GSM2373843 |
H3K27 acetylation ChIP, multi-potent progenitor |
| GSM2373845 |
Input DNA, long-term hematopoietic stem cell |
| GSM2373847 |
Input DNA, intermediate-term hematopoietic stem cell |
| GSM2373850 |
Input DNA, short-term hematopoietic stem cell |
| GSM2373852 |
Input DNA, multi-potent progenitor |
|
| This SubSeries is part of SuperSeries: |
| GSE89492 |
A retinoid-dependent and methylation-sensitive enhancer in Hoxb cluster maintains haematopoietic stem cells and prevents leukaemogenesis |
|
| Relations |
| BioProject |
PRJNA352388 |
| SRA |
SRP092543 |
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