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| Status |
Public on Mar 30, 2017 |
| Title |
MiRNA Profiling of Gastrointestinal Stromal Tumors by Next Generation Sequencing |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
Gastrointestinal stromal tumors (GISTs) have an impaired gene expression. As microRNAs (miRNAs) are involved in post-transcriptional regulation of gene expression we performed the first high-throughput miRNA profiling of 15 paired GIST formalin-fixed and paraffin-embedded samples (tumor and adjacent normal tissue) using small RNA sequencing approach.
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| |
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| Overall design |
MiRNA profiling of paired (tumor and adjacent normal tissue) GIST formalin-fixed and paraffin-embedded samples
|
| Web link |
http://www.impactjournals.com/oncotarget/index.php?journal=oncotarget&page=article&op=view&path%5B%5D=16664&path%5B%5D=53300
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| |
|
| Contributor(s) |
Skieceviciene J, Juzenas S |
| Citation(s) |
28402935, 30557328 |
| |
| Submission date |
Oct 21, 2016 |
| Last update date |
May 16, 2019 |
| Contact name |
Simonas Juzenas |
| E-mail(s) |
sjuzenas@ikmb.uni-kiel.de
|
| Organization name |
Christian-Albrechts-University of Kiel
|
| Department |
Institute of Clinical Molecular Biology
|
| Lab |
Genetics & Bioinformatics
|
| Street address |
Am Botanischen Garten 11
|
| City |
Kiel |
| ZIP/Postal code |
24118 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (30)
|
|
| Relations |
| BioProject |
PRJNA350003 |
| SRA |
SRP091930 |
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