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Series GSE88840 Query DataSets for GSE88840
Status Public on May 18, 2017
Title Conversion of adult endothelium to immunocompetent haematopoietic stem cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Developmental pathways that orchestrate the fleeting transition of endothelial cells into haematopoietic stem cells remain undefined. Here we demonstrate a tractable approach for fully reprogramming adult mouse endothelial cells to haematopoietic stem cells (rEC-HSCs) through transient expression of the transcription-factor-encoding genes Fosb, Gfi1, Runx1, and Spi1 (collectively denoted hereafter as FGRS) and vascular-niche-derived angiocrine factors. The induction phase (days 0-8) of conversion is initiated by expression of FGRS in mature endothelial cells, which results in endogenous Runx1 expression. During the specification phase (days 8-20), RUNX1+ FGRS-transduced endothelial cells commit to a haematopoietic fate, yielding rEC-HSCs that no longer require FGRS expression. The vascular niche drives a robust self-renewal and expansion phase of rEC-HSCs (days 20-28). rEC-HSCs have a transcriptome and long-term self-renewal capacity similar to those of adult haematopoietic stem cells, and can be used for clonal engraftment and serial primary and secondary multi-lineage reconstitution, including antigen-dependent adaptive immune function. Inhibition of TGF? and CXCR7 or activation of BMP and CXCR4 signalling enhanced generation of rEC-HSCs. Pluripotency-independent conversion of endothelial cells into autologous authentic engraftable haematopoietic stem cells could aid treatment of haematological disorders.
 
Overall design Expression profiling by high throughput sequencing data; GPL17021 Illumina HiSeq 2500 (Mus musculus)
 
Contributor(s) Lis R, Kunar B, Rafii S
Citation(s) 28514438
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 DK095039 Identification of vascular inductive signals in liver regeneration WEILL MEDICAL COLLEGE OF CORNELL UNIVERSITY Shahin Rafii
R01 HL097797 Contribution of the vascular niche to the hematopoietic reconstitution. WEILL MEDICAL COLLEGE OF CORNELL UNIVERSITY Shahin Rafii
R01 HL115128 Evaluation of Pluripotent Stem Cell-Derived Blood Cells in Nonhuman Primate Model FRED HUTCHINSON CANCER RESEARCH CENTER Shahin Rafii
R01 HL119872 Identification of vascular-derived signals for alveolar lung repair WEILL MEDICAL COLLEGE OF CORNELL UNIVERSITY Shahin Rafii
R01 HL128158 Deciphering molecular determinants of vascular heterogeneity for organ repair WEILL MEDICAL COLLEGE OF CORNELL UNIVERSITY Shahin Rafii
T32 HD060600 Training Program in Developmental and Stem Cell Biology WEILL MEDICAL COLLEGE OF CORNELL UNIVERSITY Heidi Stuhlmann
Submission date Oct 17, 2016
Last update date May 15, 2019
Contact name Balvir Kunar, Jr.
E-mail(s) bak2010@med.cornell.edu
Organization name Weill Cornell Medical College
Department Regenerative Medicine; Physiology, Biophysics, & Systems Biology
Lab Shahin Rafii, M.D.
Street address 1300 York Ave
City New York City
State/province New York
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (30)
GSM2350012 Control_LKS.SLAM_3
GSM2350013 rEC-LKS-SLAM_1
GSM2375415 Control_Gr1+Cd11b+_1
Relations
BioProject PRJNA348758
SRA SRP091674

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Supplementary file Size Download File type/resource
GSE88840_Manuscript_Endothelial.Haematopoietic.Conversion_RNA-Seq_Data_vS.MM10.GENES.FPKM.tsv.gz 2.1 Mb (ftp)(http) TSV
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Raw data are available in SRA
Processed data are available on Series record

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