 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Nov 23, 2016 |
| Title |
R:FR and blue signaling during competition at high plant densities |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
|
| Summary |
Growth in dense stands induces shade avoidance responses. Late stages of stand development lead to low red:far-red (R:FR) and low blue light conditions.
We studied gene expression in late stages of canopy development when both light signals were present, and studied gene expression in the single and combined light treatments.
|
| |
|
| Overall design |
Plants were grown either single (all light treatments, and canopy control), or put in a high density of 2066 plants / m2. Gene expression measured in petioles.
|
| |
|
| Contributor(s) |
Pierik R, de Wit M |
| Citation(s) |
27889265 |
| |
| Submission date |
Oct 07, 2016 |
| Last update date |
Jun 12, 2017 |
| Contact name |
Ronald Pierik |
| E-mail(s) |
r.pierik@uu.nl
|
| Organization name |
Utrecht University
|
| Department |
Plant Ecophysiology
|
| Street address |
Padualaan 8
|
| City |
Utrecht |
| ZIP/Postal code |
3584CH |
| Country |
Netherlands |
| |
|
| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
|
| Samples (18)
|
| GSM2340091 |
High density plants, rep1 |
| GSM2340092 |
High density plants, rep2 |
| GSM2340093 |
High density plants, rep3 |
| GSM2340094 |
Control light, rep1 |
| GSM2340095 |
Control light, rep2 |
| GSM2340096 |
Control light, rep3 |
| GSM2340097 |
Low R:FR light, rep1 |
| GSM2340098 |
Low R:FR light, rep2 |
| GSM2340099 |
Low R:FR light, rep3 |
| GSM2340100 |
Low blue light, rep1 |
| GSM2340101 |
Low blue light, rep2 |
| GSM2340102 |
Low blue light, rep3 |
| GSM2340103 |
Low blue + low R:FR light, rep1 |
| GSM2340104 |
Low blue + low R:FR light, rep2 |
| GSM2340105 |
Low blue + low R:FR light, rep3 |
|
| Relations |
| BioProject |
PRJNA347371 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE87770_RAW.tar |
25.6 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
|
|
|
|
 |
Less...
More...