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Series GSE87412 Query DataSets for GSE87412
Status Public on Jun 13, 2017
Title Loss of Dnmt3a and Dnmt3b does not affect epidermal homeostasis but promotes squamous transformation through PPAR-γ
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 28425913
Submission date Sep 27, 2016
Last update date Apr 09, 2020
Contact name Lorenzo Rinaldi
E-mail(s) lorenzo.rinaldi@irbbarcelona.org
Phone 0034619908437
Organization name IRB
Department Oncology
Lab Stem Cells and Cancer
Street address Carrer Reixac Baldiri 10
City Barcelona
State/province Spain
ZIP/Postal code 08028
Country Spain
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (38)
GSM2667590 H3K27ac ChIP-seq WT DMBA Back skin treated
GSM2667591 H3K27ac ChIP-seq WT Belly skin untreated
GSM2667592 Dnmt3A ChIP-seq WT DMBA Back skin treated
This SuperSeries is composed of the following SubSeries:
GSE92421 Dnmt3a associates with promoters and enhancers to protect epidermal stem cells from cancer [ChIP-seq]
GSE92422 Dnmt3a associates with promoters and enhancers to protect epidermal stem cells from cancer [MeDIP-seq]
GSE92423 Dnmt3a associates with promoters and enhancers to protect epidermal stem cells from cancer [RNA-seq]
Relations
BioProject PRJNA390300

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary data files not provided
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Raw data are available in SRA
Processed data are available on Series record

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