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Series GSE86261 Query DataSets for GSE86261
Status Public on Sep 01, 2016
Title Transcriptional Maintenance of Pancreatic Acinar Identity, Differentiation and Homeostasis by PTF1A [6-day RNA-Seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq analysis documented mRNA changes in total pancreatic RNA preparations 6 days after Ptf1a inactivation.
 
Overall design pancreas mRNA profiles of Tamoxifen treated adult control mice [Ptf1a(CreER/+)] and Ptf1a conditional knockout mice [Ptf1a(CreER/fl)] were generated by deep sequencing using an Illumina Hiseq 2500.
 
Contributor(s) Hoang C, Swift GH, Azevedo-Pouly A, MacDonald RJ
Citation(s) 27697859
Submission date Aug 31, 2016
Last update date May 15, 2019
Contact name Galvin Swift
E-mail(s) galvin.swift@utsouthwestern.edu
Organization name U TX Southwestern Medical Center
Department Molecular Biology
Lab Ray MacDonald
Street address 6000 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390-9148
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (8)
GSM2299174 6d_CT1
GSM2299175 6d_CT2
GSM2299176 6d_CT3
This SubSeries is part of SuperSeries:
GSE86263 Transcriptional Maintenance of Pancreatic Acinar Identity, Differentiation and Homeostasis by PTF1A
Relations
BioProject PRJNA341324
SRA SRP083848

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE86261_DE_Ptf1a_cKO_6-day_edgeR_Processed.xlsx 1.1 Mb (ftp)(http) XLSX
GSE86261_RAW.tar 730.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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