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Series GSE86080 Query DataSets for GSE86080
Status Public on Aug 25, 2018
Title Effect of green tea extract on systemic metabolic homeostasis in diet-induced obese mice; based on RNA-sequencing transcriptome profiles
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We investigated the effect of green tea extract on phenotype characteristics and elucidated anti-obesity mechanism based on RNA-seq transcriptomic profiles in an obesity animal model.
 
Overall design Total RNA of epididymal adipose tissues and liver were obtained from normal diet, high-fat diet and green tea extract added high-fat diet-fed mice and mRNA expression-associated with lipid, and glucose metabolism was measured.
 
Contributor(s) Choi J, Choi M
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Submission date Aug 25, 2016
Last update date May 15, 2019
Contact name Ji-Young Choi
Organization name Kyungpook National University
Department Food Sciences and Nutrition
Street address 80 Daehakro
City Daegu
ZIP/Postal code 702-701
Country South Korea
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (18)
GSM2293222 Normal diet_mRNA_adipose_1
GSM2293223 Normal diet_mRNA_adipose_2
GSM2293224 Normal diet_mRNA_adipose_3
Relations
BioProject PRJNA340194
SRA SRP082989

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE86080_genes_FPKM.txt.gz 1.2 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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