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Series GSE85936 Query DataSets for GSE85936
Status Public on Aug 23, 2017
Title E2F3a mediates cocaine action in nucleus accumbens via alternative splicing and transcription
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Long-lasting changes in neuronal gene expression in brain reward regions, including the nucleus accumbens (NAc), contribute to the persistent functional changes in the addicted brain. Our group and others have demonstrated that altered expression or activity of several candidate transcription factors in NAc regulates drug responses. In a recent study from our group (Feng et al., 2014), involving large-scale genome-wide datasets, E2F3 was predicted as a prominent upstream regulator of cocaine-induced changes in gene expression and alternative splicing. Here, we show that E2F3a, but not E2F3b, expression in NAc regulates cocaine-induced locomotor and reward behavior. Furthermore, we demonstrate that E2F3a overexpression recapitulates a considerable portion of genome-wide transcriptional profiles and alternative splicing induced by cocaine administration. We further validate functional binding of E2F3a at several target genes following cocaine exposure. These novel findings support a crucial role for E2F3a in the regulation of cocaine-elicited behavioral states and molecular mechanisms.
 
Overall design mRNA profiles were generated in response to viral-mediated overexpression of E2F3a or GFP followed by either saline or cocaine treatment, with a sample size of 3-4 per group.
 
Contributor(s) Cates HM, Nestler EJ
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Submission date Aug 23, 2016
Last update date May 15, 2019
Contact name Immanuel Purushothaman
E-mail(s) immanuel.purushothaman@mssm.edu
Organization name Icahn School of Medicine at Mount Sinai
Department Neuroscience
Street address 1425 Madison Avenue
City New York
State/province New York
ZIP/Postal code 10029
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (11)
GSM2288037 GFP_COC_2
GSM2288038 GFP_COC_4
GSM2288039 GFP_COC_5
Relations
BioProject PRJNA339778
SRA SRP082566

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE85936_Differential_lists.xls.gz 2.7 Mb (ftp)(http) XLS
GSE85936_RAW.tar 657.1 Mb (http)(custom) TAR (of TDF)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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