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Series GSE84988 Query DataSets for GSE84988
Status Public on Jul 31, 2018
Title Expression of MLL-ENL in hematopoietic stem cells induces mixed lineage acute leukemia
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The t(11;19)(q23;p13.3) translocation leading to the expression of an MLL-ENL fusion is one of the most prevalent alterations affecting the mixed lineage leukemia 1 (MLL1) gene, mostly associated with B-cell acute lymphoblastic leukemia (ALL). Using a doxycycline (DOX)-inducible transgenic mouse model (“iMLL-ENL”) we show that direct induction or induction following transplantation of hematopoietic stem cells (HSC) but not of committed myeloid granulocyte-macrophage progenitors (GMP) leads to reversible acute mixed lineage leukemia. Disease induction was associated with iMLL-ENL levels exceeding the endogenous Mll1. iMLL-ENL leukemia was composed of small B220High cells with higher leukemia-initiating potential than co-existing larger-sized B220Low cells. Collectively, characterization of a novel transgenic mouse model indicates that the cell-of-origin and the expression levels above Mll1/MLL1 are both critical determinants for mixed lineage leukemia induced by the MLL-ENL fusion.
 
Overall design RNA-sequencing of hematopoietic stem cells in control and iMLL-ENLleukemic mice (total bone marrow or sorted for HIGH and LOW expression levels of the surface marker B220)
 
Contributor(s) Royo H, Stavropoulou V, Schwaller J, Peters AM
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Submission date Jul 29, 2016
Last update date May 15, 2019
Contact name Antoine Peters
E-mail(s) antoine.peters@fmi.ch
Organization name Friedrich Miescher Institute for Biomedical Research (FMI)
Street address Maulbeerstrasse 66
City Basel
ZIP/Postal code 4058
Country Switzerland
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (12)
GSM2255580 wtLSK_1
GSM2255581 wtLSK_2
GSM2255582 wtLSK_3
Relations
BioProject PRJNA335836
SRA SRP080322

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84988_4_counts_ME-LOW_ME-HIGH.csv.gz 273.5 Kb (ftp)(http) CSV
GSE84988_4_counts_WT-LSK_ME-M.csv.gz 283.6 Kb (ftp)(http) CSV
GSE84988_4_cpms_ME-HIGH_ME-LOW.csv.gz 646.5 Kb (ftp)(http) CSV
GSE84988_4_cpms_ME-M_WT-LSK.csv.gz 687.4 Kb (ftp)(http) CSV
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Processed data are available on Series record

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