|
Status |
Public on Jan 28, 2017 |
Title |
Massively multiplex single-cell Hi-C |
Organisms |
Homo sapiens; Mus musculus |
Experiment type |
Other
|
Summary |
Proof-of-concept for a massively parallel single-cell version of the Hi-C protocol
|
|
|
Overall design |
Single-cell Hi-C
Raw data for GSM2254215, GSM2254216, GSM2254218, GSM2254219 and GSM2438426 were submitted to dbGaP due to patient privacy concerns. The raw data are available at dbGaP accession ID phs001269.v1.p1.
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|
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Contributor(s) |
Ramani V |
Citation(s) |
28135255 |
NIH grant(s) |
Grant ID |
Grant title |
Affiliation |
Name |
R01 HG006283 |
Massively parallel contiguity mapping: Massively Parallel Contiguity Mapping: Massively parallel contiguity mapping: Massively parallel contiguity mapping: Massively Parallel Contiguity Mapping: Massively Parallel Contiguity Mapping |
UNIVERSITY OF WASHINGTON |
Jay Ashok Shendure |
U54 DK107979 |
University of Washington Center for Nuclear Organization and Function |
UNIVERSITY OF WASHINGTON |
William Stafford Noble, Jay Ashok Shendure |
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|
Submission date |
Jul 27, 2016 |
Last update date |
May 15, 2019 |
Contact name |
Vijay Ramani |
Organization name |
UCSF
|
Department |
Biochemistry & Biophysics
|
Lab |
Ramani Lab
|
Street address |
600 16th St, GH-S312B
|
City |
San Francisco |
State/province |
California |
ZIP/Postal code |
94143 |
Country |
USA |
|
|
Platforms (1) |
GPL22245 |
Illumina HiSeq 2500 (Homo sapiens; Mus musculus) |
|
Samples (6)
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|
Relations |
BioProject |
PRJNA335638 |
SRA |
SRP079988 |