|
| Status |
Public on Sep 16, 2016 |
| Title |
Single-nucleotide-resolution mapping of HBV promoters using CAGE |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We provide a comprehensive map of transcription start sites (TSSs) for HBV at single nucleotide resolution using CAGE.
|
| |
|
| Overall design |
Expression profiles using CAGE for HepG2.2.15 (3 replicates), primary human hepatocytes (3 replicates), HepAD38 (2 replicates) and mouse liver tranduced with AAV-HBV (3 replicates)
|
| |
|
| Contributor(s) |
Hashimoto K, Gupta I, Neuveut C, Wei Y, Carninci P, Annick M |
| Citation(s) |
27681123 |
| |
| Submission date |
Jul 08, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Kosuke Hashimoto |
| E-mail(s) |
kosuke.hashimoto@riken.jp
|
| Organization name |
RIKEN
|
| Department |
IMS
|
| Street address |
1-7-22 Suehiro-cho, Tsurumi-ku
|
| City |
Yokohama |
| State/province |
Kanagawa |
| ZIP/Postal code |
224-0001 |
| Country |
Japan |
| |
|
| Platforms (2) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (11)
|
|
| Relations |
| BioProject |
PRJNA328244 |
| SRA |
SRP078148 |
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